Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26600 | 80023;80024;80025 | chr2:178566334;178566333;178566332 | chr2:179431061;179431060;179431059 |
N2AB | 24959 | 75100;75101;75102 | chr2:178566334;178566333;178566332 | chr2:179431061;179431060;179431059 |
N2A | 24032 | 72319;72320;72321 | chr2:178566334;178566333;178566332 | chr2:179431061;179431060;179431059 |
N2B | 17535 | 52828;52829;52830 | chr2:178566334;178566333;178566332 | chr2:179431061;179431060;179431059 |
Novex-1 | 17660 | 53203;53204;53205 | chr2:178566334;178566333;178566332 | chr2:179431061;179431060;179431059 |
Novex-2 | 17727 | 53404;53405;53406 | chr2:178566334;178566333;178566332 | chr2:179431061;179431060;179431059 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.988 | D | 0.58 | 0.442 | 0.393316636838 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8776 | likely_pathogenic | 0.8519 | pathogenic | 0.032 | Stabilizing | 0.968 | D | 0.54 | neutral | None | None | None | None | I |
K/C | 0.9458 | likely_pathogenic | 0.9384 | pathogenic | -0.244 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
K/D | 0.9388 | likely_pathogenic | 0.931 | pathogenic | 0.098 | Stabilizing | 0.991 | D | 0.541 | neutral | None | None | None | None | I |
K/E | 0.7816 | likely_pathogenic | 0.7162 | pathogenic | 0.087 | Stabilizing | 0.919 | D | 0.499 | neutral | D | 0.535907848 | None | None | I |
K/F | 0.9851 | likely_pathogenic | 0.9822 | pathogenic | -0.298 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
K/G | 0.8877 | likely_pathogenic | 0.8702 | pathogenic | -0.121 | Destabilizing | 0.991 | D | 0.477 | neutral | None | None | None | None | I |
K/H | 0.7167 | likely_pathogenic | 0.6867 | pathogenic | -0.364 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | I |
K/I | 0.9198 | likely_pathogenic | 0.9036 | pathogenic | 0.349 | Stabilizing | 0.994 | D | 0.651 | neutral | D | 0.531592666 | None | None | I |
K/L | 0.8481 | likely_pathogenic | 0.8194 | pathogenic | 0.349 | Stabilizing | 0.991 | D | 0.477 | neutral | None | None | None | None | I |
K/M | 0.8013 | likely_pathogenic | 0.7511 | pathogenic | 0.174 | Stabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | I |
K/N | 0.8972 | likely_pathogenic | 0.8752 | pathogenic | 0.245 | Stabilizing | 0.988 | D | 0.58 | neutral | D | 0.536947998 | None | None | I |
K/P | 0.9687 | likely_pathogenic | 0.9717 | pathogenic | 0.269 | Stabilizing | 0.995 | D | 0.607 | neutral | None | None | None | None | I |
K/Q | 0.4644 | ambiguous | 0.4097 | ambiguous | 0.067 | Stabilizing | 0.414 | N | 0.325 | neutral | N | 0.497120174 | None | None | I |
K/R | 0.1167 | likely_benign | 0.1102 | benign | 0.025 | Stabilizing | 0.919 | D | 0.517 | neutral | N | 0.491655639 | None | None | I |
K/S | 0.904 | likely_pathogenic | 0.8829 | pathogenic | -0.227 | Destabilizing | 0.968 | D | 0.557 | neutral | None | None | None | None | I |
K/T | 0.74 | likely_pathogenic | 0.6973 | pathogenic | -0.103 | Destabilizing | 0.988 | D | 0.545 | neutral | N | 0.492724357 | None | None | I |
K/V | 0.8887 | likely_pathogenic | 0.8666 | pathogenic | 0.269 | Stabilizing | 0.991 | D | 0.561 | neutral | None | None | None | None | I |
K/W | 0.9605 | likely_pathogenic | 0.9591 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
K/Y | 0.945 | likely_pathogenic | 0.9368 | pathogenic | 0.028 | Stabilizing | 0.998 | D | 0.594 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.