Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26606 | 80041;80042;80043 | chr2:178566316;178566315;178566314 | chr2:179431043;179431042;179431041 |
N2AB | 24965 | 75118;75119;75120 | chr2:178566316;178566315;178566314 | chr2:179431043;179431042;179431041 |
N2A | 24038 | 72337;72338;72339 | chr2:178566316;178566315;178566314 | chr2:179431043;179431042;179431041 |
N2B | 17541 | 52846;52847;52848 | chr2:178566316;178566315;178566314 | chr2:179431043;179431042;179431041 |
Novex-1 | 17666 | 53221;53222;53223 | chr2:178566316;178566315;178566314 | chr2:179431043;179431042;179431041 |
Novex-2 | 17733 | 53422;53423;53424 | chr2:178566316;178566315;178566314 | chr2:179431043;179431042;179431041 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | rs779734456 | -0.37 | 0.998 | N | 0.747 | 0.515 | 0.42130639912 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
A/G | rs779734456 | None | 0.979 | N | 0.581 | 0.354 | 0.311691414656 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.682 | likely_pathogenic | 0.7036 | pathogenic | -0.715 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
A/D | 0.9173 | likely_pathogenic | 0.9199 | pathogenic | -0.88 | Destabilizing | 0.998 | D | 0.747 | deleterious | N | 0.479685399 | None | None | I |
A/E | 0.8461 | likely_pathogenic | 0.8628 | pathogenic | -1.04 | Destabilizing | 0.995 | D | 0.731 | prob.delet. | None | None | None | None | I |
A/F | 0.8113 | likely_pathogenic | 0.7712 | pathogenic | -1.127 | Destabilizing | 0.991 | D | 0.777 | deleterious | None | None | None | None | I |
A/G | 0.3958 | ambiguous | 0.4003 | ambiguous | -0.573 | Destabilizing | 0.979 | D | 0.581 | neutral | N | 0.519439081 | None | None | I |
A/H | 0.8288 | likely_pathogenic | 0.821 | pathogenic | -0.635 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
A/I | 0.7914 | likely_pathogenic | 0.775 | pathogenic | -0.507 | Destabilizing | 0.938 | D | 0.665 | neutral | None | None | None | None | I |
A/K | 0.9065 | likely_pathogenic | 0.9151 | pathogenic | -0.839 | Destabilizing | 0.995 | D | 0.73 | prob.delet. | None | None | None | None | I |
A/L | 0.7065 | likely_pathogenic | 0.6945 | pathogenic | -0.507 | Destabilizing | 0.938 | D | 0.526 | neutral | None | None | None | None | I |
A/M | 0.6836 | likely_pathogenic | 0.6835 | pathogenic | -0.346 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
A/N | 0.7412 | likely_pathogenic | 0.7424 | pathogenic | -0.425 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | I |
A/P | 0.9556 | likely_pathogenic | 0.9427 | pathogenic | -0.471 | Destabilizing | 0.998 | D | 0.73 | prob.delet. | N | 0.491673588 | None | None | I |
A/Q | 0.732 | likely_pathogenic | 0.7666 | pathogenic | -0.776 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | I |
A/R | 0.8266 | likely_pathogenic | 0.8321 | pathogenic | -0.289 | Destabilizing | 0.995 | D | 0.755 | deleterious | None | None | None | None | I |
A/S | 0.1549 | likely_benign | 0.1634 | benign | -0.6 | Destabilizing | 0.979 | D | 0.562 | neutral | N | 0.466251952 | None | None | I |
A/T | 0.4697 | ambiguous | 0.4843 | ambiguous | -0.693 | Destabilizing | 0.958 | D | 0.675 | neutral | N | 0.475873511 | None | None | I |
A/V | 0.481 | ambiguous | 0.4689 | ambiguous | -0.471 | Destabilizing | 0.142 | N | 0.381 | neutral | N | 0.456208639 | None | None | I |
A/W | 0.9617 | likely_pathogenic | 0.9524 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
A/Y | 0.8576 | likely_pathogenic | 0.8395 | pathogenic | -0.918 | Destabilizing | 0.995 | D | 0.784 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.