Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26612 | 80059;80060;80061 | chr2:178566298;178566297;178566296 | chr2:179431025;179431024;179431023 |
N2AB | 24971 | 75136;75137;75138 | chr2:178566298;178566297;178566296 | chr2:179431025;179431024;179431023 |
N2A | 24044 | 72355;72356;72357 | chr2:178566298;178566297;178566296 | chr2:179431025;179431024;179431023 |
N2B | 17547 | 52864;52865;52866 | chr2:178566298;178566297;178566296 | chr2:179431025;179431024;179431023 |
Novex-1 | 17672 | 53239;53240;53241 | chr2:178566298;178566297;178566296 | chr2:179431025;179431024;179431023 |
Novex-2 | 17739 | 53440;53441;53442 | chr2:178566298;178566297;178566296 | chr2:179431025;179431024;179431023 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.426 | N | 0.448 | 0.227 | 0.596036732933 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9811 | likely_pathogenic | 0.9776 | pathogenic | -2.481 | Highly Destabilizing | 0.916 | D | 0.707 | prob.neutral | None | None | None | None | N |
I/C | 0.9682 | likely_pathogenic | 0.9628 | pathogenic | -1.801 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
I/D | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -2.783 | Highly Destabilizing | 0.996 | D | 0.827 | deleterious | None | None | None | None | N |
I/E | 0.998 | likely_pathogenic | 0.9977 | pathogenic | -2.522 | Highly Destabilizing | 0.987 | D | 0.827 | deleterious | None | None | None | None | N |
I/F | 0.5089 | ambiguous | 0.4577 | ambiguous | -1.52 | Destabilizing | 0.967 | D | 0.718 | prob.delet. | N | 0.478424478 | None | None | N |
I/G | 0.9956 | likely_pathogenic | 0.9948 | pathogenic | -3.019 | Highly Destabilizing | 0.987 | D | 0.829 | deleterious | None | None | None | None | N |
I/H | 0.9951 | likely_pathogenic | 0.9941 | pathogenic | -2.322 | Highly Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
I/K | 0.9946 | likely_pathogenic | 0.9941 | pathogenic | -2.085 | Highly Destabilizing | 0.987 | D | 0.827 | deleterious | None | None | None | None | N |
I/L | 0.2282 | likely_benign | 0.2271 | benign | -0.909 | Destabilizing | 0.011 | N | 0.311 | neutral | N | 0.37377717 | None | None | N |
I/M | 0.3273 | likely_benign | 0.3122 | benign | -0.858 | Destabilizing | 0.967 | D | 0.684 | prob.neutral | N | 0.48137993 | None | None | N |
I/N | 0.9893 | likely_pathogenic | 0.9874 | pathogenic | -2.596 | Highly Destabilizing | 0.994 | D | 0.825 | deleterious | N | 0.52023268 | None | None | N |
I/P | 0.997 | likely_pathogenic | 0.9969 | pathogenic | -1.417 | Destabilizing | 0.996 | D | 0.822 | deleterious | None | None | None | None | N |
I/Q | 0.9944 | likely_pathogenic | 0.9932 | pathogenic | -2.374 | Highly Destabilizing | 0.996 | D | 0.825 | deleterious | None | None | None | None | N |
I/R | 0.9927 | likely_pathogenic | 0.9917 | pathogenic | -1.914 | Destabilizing | 0.987 | D | 0.819 | deleterious | None | None | None | None | N |
I/S | 0.9892 | likely_pathogenic | 0.9871 | pathogenic | -3.255 | Highly Destabilizing | 0.983 | D | 0.796 | deleterious | N | 0.52023268 | None | None | N |
I/T | 0.9905 | likely_pathogenic | 0.988 | pathogenic | -2.831 | Highly Destabilizing | 0.967 | D | 0.755 | deleterious | N | 0.51997919 | None | None | N |
I/V | 0.2692 | likely_benign | 0.2479 | benign | -1.417 | Destabilizing | 0.426 | N | 0.448 | neutral | N | 0.512356198 | None | None | N |
I/W | 0.983 | likely_pathogenic | 0.9811 | pathogenic | -1.807 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
I/Y | 0.9406 | likely_pathogenic | 0.9359 | pathogenic | -1.536 | Destabilizing | 0.987 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.