Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26613 | 80062;80063;80064 | chr2:178566295;178566294;178566293 | chr2:179431022;179431021;179431020 |
N2AB | 24972 | 75139;75140;75141 | chr2:178566295;178566294;178566293 | chr2:179431022;179431021;179431020 |
N2A | 24045 | 72358;72359;72360 | chr2:178566295;178566294;178566293 | chr2:179431022;179431021;179431020 |
N2B | 17548 | 52867;52868;52869 | chr2:178566295;178566294;178566293 | chr2:179431022;179431021;179431020 |
Novex-1 | 17673 | 53242;53243;53244 | chr2:178566295;178566294;178566293 | chr2:179431022;179431021;179431020 |
Novex-2 | 17740 | 53443;53444;53445 | chr2:178566295;178566294;178566293 | chr2:179431022;179431021;179431020 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | rs1276864550 | 1.14 | 0.013 | N | 0.162 | 0.135 | 0.235038932564 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
H/Y | rs1276864550 | 1.14 | 0.013 | N | 0.162 | 0.135 | 0.235038932564 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85876E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3219 | likely_benign | 0.3184 | benign | -0.584 | Destabilizing | 0.103 | N | 0.389 | neutral | None | None | None | None | N |
H/C | 0.1883 | likely_benign | 0.181 | benign | 0.191 | Stabilizing | 0.002 | N | 0.367 | neutral | None | None | None | None | N |
H/D | 0.4041 | ambiguous | 0.3593 | ambiguous | -0.685 | Destabilizing | 0.166 | N | 0.412 | neutral | N | 0.426139936 | None | None | N |
H/E | 0.4905 | ambiguous | 0.445 | ambiguous | -0.575 | Destabilizing | 0.345 | N | 0.304 | neutral | None | None | None | None | N |
H/F | 0.222 | likely_benign | 0.2248 | benign | 0.804 | Stabilizing | 0.39 | N | 0.494 | neutral | None | None | None | None | N |
H/G | 0.4423 | ambiguous | 0.4476 | ambiguous | -0.964 | Destabilizing | 0.209 | N | 0.41 | neutral | None | None | None | None | N |
H/I | 0.2514 | likely_benign | 0.2525 | benign | 0.47 | Stabilizing | 0.722 | D | 0.548 | neutral | None | None | None | None | N |
H/K | 0.4626 | ambiguous | 0.4141 | ambiguous | -0.441 | Destabilizing | 0.345 | N | 0.415 | neutral | None | None | None | None | N |
H/L | 0.1219 | likely_benign | 0.12 | benign | 0.47 | Stabilizing | 0.285 | N | 0.431 | neutral | N | 0.43589557 | None | None | N |
H/M | 0.4007 | ambiguous | 0.4125 | ambiguous | 0.238 | Stabilizing | 0.965 | D | 0.518 | neutral | None | None | None | None | N |
H/N | 0.1196 | likely_benign | 0.1155 | benign | -0.689 | Destabilizing | 0.001 | N | 0.163 | neutral | N | 0.398241259 | None | None | N |
H/P | 0.3638 | ambiguous | 0.3542 | ambiguous | 0.139 | Stabilizing | 0.662 | D | 0.589 | neutral | N | 0.432297904 | None | None | N |
H/Q | 0.2398 | likely_benign | 0.2283 | benign | -0.424 | Destabilizing | 0.491 | N | 0.393 | neutral | N | 0.437645009 | None | None | N |
H/R | 0.2047 | likely_benign | 0.1825 | benign | -1.057 | Destabilizing | 0.491 | N | 0.316 | neutral | N | 0.435375495 | None | None | N |
H/S | 0.2366 | likely_benign | 0.2303 | benign | -0.601 | Destabilizing | 0.007 | N | 0.234 | neutral | None | None | None | None | N |
H/T | 0.2663 | likely_benign | 0.2581 | benign | -0.379 | Destabilizing | 0.209 | N | 0.43 | neutral | None | None | None | None | N |
H/V | 0.2151 | likely_benign | 0.2227 | benign | 0.139 | Stabilizing | 0.561 | D | 0.497 | neutral | None | None | None | None | N |
H/W | 0.4212 | ambiguous | 0.4099 | ambiguous | 1.108 | Stabilizing | 0.991 | D | 0.515 | neutral | None | None | None | None | N |
H/Y | 0.0918 | likely_benign | 0.0895 | benign | 1.125 | Stabilizing | 0.013 | N | 0.162 | neutral | N | 0.410557195 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.