Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26615 | 80068;80069;80070 | chr2:178566289;178566288;178566287 | chr2:179431016;179431015;179431014 |
N2AB | 24974 | 75145;75146;75147 | chr2:178566289;178566288;178566287 | chr2:179431016;179431015;179431014 |
N2A | 24047 | 72364;72365;72366 | chr2:178566289;178566288;178566287 | chr2:179431016;179431015;179431014 |
N2B | 17550 | 52873;52874;52875 | chr2:178566289;178566288;178566287 | chr2:179431016;179431015;179431014 |
Novex-1 | 17675 | 53248;53249;53250 | chr2:178566289;178566288;178566287 | chr2:179431016;179431015;179431014 |
Novex-2 | 17742 | 53449;53450;53451 | chr2:178566289;178566288;178566287 | chr2:179431016;179431015;179431014 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.958 | D | 0.613 | 0.414 | 0.386721274199 | gnomAD-4.0.0 | 6.8426E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99526E-07 | 0 | 0 |
P/S | None | None | 0.994 | N | 0.774 | 0.323 | 0.398581233421 | gnomAD-4.0.0 | 1.36852E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7343E-04 | 0 | 0 | 1.65695E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1491 | likely_benign | 0.1564 | benign | -1.185 | Destabilizing | 0.958 | D | 0.613 | neutral | D | 0.530016452 | None | None | N |
P/C | 0.661 | likely_pathogenic | 0.6671 | pathogenic | -0.672 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
P/D | 0.8525 | likely_pathogenic | 0.837 | pathogenic | -1.294 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
P/E | 0.7171 | likely_pathogenic | 0.712 | pathogenic | -1.28 | Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | N |
P/F | 0.7179 | likely_pathogenic | 0.7253 | pathogenic | -0.89 | Destabilizing | 0.998 | D | 0.784 | deleterious | None | None | None | None | N |
P/G | 0.5289 | ambiguous | 0.5645 | pathogenic | -1.481 | Destabilizing | 0.995 | D | 0.751 | deleterious | None | None | None | None | N |
P/H | 0.4363 | ambiguous | 0.4362 | ambiguous | -0.983 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
P/I | 0.4552 | ambiguous | 0.4607 | ambiguous | -0.472 | Destabilizing | 0.334 | N | 0.591 | neutral | None | None | None | None | N |
P/K | 0.6471 | likely_pathogenic | 0.6424 | pathogenic | -1.081 | Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
P/L | 0.1849 | likely_benign | 0.2005 | benign | -0.472 | Destabilizing | 0.797 | D | 0.703 | prob.neutral | N | 0.502062291 | None | None | N |
P/M | 0.512 | ambiguous | 0.5314 | ambiguous | -0.392 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
P/N | 0.6272 | likely_pathogenic | 0.6257 | pathogenic | -0.958 | Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | N |
P/Q | 0.4001 | ambiguous | 0.4088 | ambiguous | -1.099 | Destabilizing | 0.998 | D | 0.806 | deleterious | N | 0.493602367 | None | None | N |
P/R | 0.4461 | ambiguous | 0.4404 | ambiguous | -0.559 | Destabilizing | 0.998 | D | 0.792 | deleterious | D | 0.532806041 | None | None | N |
P/S | 0.2785 | likely_benign | 0.2801 | benign | -1.365 | Destabilizing | 0.994 | D | 0.774 | deleterious | N | 0.516375151 | None | None | N |
P/T | 0.219 | likely_benign | 0.2217 | benign | -1.246 | Destabilizing | 0.988 | D | 0.739 | prob.delet. | N | 0.487975042 | None | None | N |
P/V | 0.3461 | ambiguous | 0.3529 | ambiguous | -0.676 | Destabilizing | 0.839 | D | 0.633 | neutral | None | None | None | None | N |
P/W | 0.8565 | likely_pathogenic | 0.8736 | pathogenic | -1.135 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
P/Y | 0.6878 | likely_pathogenic | 0.7033 | pathogenic | -0.806 | Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.