Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26616 | 80071;80072;80073 | chr2:178566286;178566285;178566284 | chr2:179431013;179431012;179431011 |
N2AB | 24975 | 75148;75149;75150 | chr2:178566286;178566285;178566284 | chr2:179431013;179431012;179431011 |
N2A | 24048 | 72367;72368;72369 | chr2:178566286;178566285;178566284 | chr2:179431013;179431012;179431011 |
N2B | 17551 | 52876;52877;52878 | chr2:178566286;178566285;178566284 | chr2:179431013;179431012;179431011 |
Novex-1 | 17676 | 53251;53252;53253 | chr2:178566286;178566285;178566284 | chr2:179431013;179431012;179431011 |
Novex-2 | 17743 | 53452;53453;53454 | chr2:178566286;178566285;178566284 | chr2:179431013;179431012;179431011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1705818116 | None | 0.369 | N | 0.601 | 0.421 | 0.274366138417 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07681E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9481 | likely_pathogenic | 0.9472 | pathogenic | -2.639 | Highly Destabilizing | 0.916 | D | 0.739 | prob.delet. | None | None | None | None | N |
F/C | 0.597 | likely_pathogenic | 0.554 | ambiguous | -1.576 | Destabilizing | 0.999 | D | 0.767 | deleterious | N | 0.489251182 | None | None | N |
F/D | 0.9985 | likely_pathogenic | 0.9985 | pathogenic | -2.544 | Highly Destabilizing | 0.996 | D | 0.817 | deleterious | None | None | None | None | N |
F/E | 0.9976 | likely_pathogenic | 0.9975 | pathogenic | -2.381 | Highly Destabilizing | 0.996 | D | 0.816 | deleterious | None | None | None | None | N |
F/G | 0.9858 | likely_pathogenic | 0.9868 | pathogenic | -3.045 | Highly Destabilizing | 0.987 | D | 0.814 | deleterious | None | None | None | None | N |
F/H | 0.9475 | likely_pathogenic | 0.9463 | pathogenic | -1.374 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
F/I | 0.4993 | ambiguous | 0.4611 | ambiguous | -1.347 | Destabilizing | 0.056 | N | 0.393 | neutral | N | 0.407858032 | None | None | N |
F/K | 0.9954 | likely_pathogenic | 0.9954 | pathogenic | -1.987 | Destabilizing | 0.987 | D | 0.817 | deleterious | None | None | None | None | N |
F/L | 0.966 | likely_pathogenic | 0.9567 | pathogenic | -1.347 | Destabilizing | 0.369 | N | 0.601 | neutral | N | 0.497597389 | None | None | N |
F/M | 0.8352 | likely_pathogenic | 0.8222 | pathogenic | -0.965 | Destabilizing | 0.975 | D | 0.727 | prob.delet. | None | None | None | None | N |
F/N | 0.9889 | likely_pathogenic | 0.9887 | pathogenic | -2.308 | Highly Destabilizing | 0.996 | D | 0.812 | deleterious | None | None | None | None | N |
F/P | 0.9988 | likely_pathogenic | 0.9989 | pathogenic | -1.783 | Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | N |
F/Q | 0.9882 | likely_pathogenic | 0.9887 | pathogenic | -2.32 | Highly Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
F/R | 0.9868 | likely_pathogenic | 0.9867 | pathogenic | -1.37 | Destabilizing | 0.996 | D | 0.818 | deleterious | None | None | None | None | N |
F/S | 0.9454 | likely_pathogenic | 0.9438 | pathogenic | -2.985 | Highly Destabilizing | 0.983 | D | 0.787 | deleterious | D | 0.528171012 | None | None | N |
F/T | 0.9602 | likely_pathogenic | 0.9568 | pathogenic | -2.719 | Highly Destabilizing | 0.975 | D | 0.781 | deleterious | None | None | None | None | N |
F/V | 0.4707 | ambiguous | 0.4424 | ambiguous | -1.783 | Destabilizing | 0.587 | D | 0.66 | neutral | N | 0.405233441 | None | None | N |
F/W | 0.7648 | likely_pathogenic | 0.7773 | pathogenic | -0.39 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
F/Y | 0.3062 | likely_benign | 0.3151 | benign | -0.72 | Destabilizing | 0.944 | D | 0.605 | neutral | N | 0.515415146 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.