Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26621 | 80086;80087;80088 | chr2:178566271;178566270;178566269 | chr2:179430998;179430997;179430996 |
N2AB | 24980 | 75163;75164;75165 | chr2:178566271;178566270;178566269 | chr2:179430998;179430997;179430996 |
N2A | 24053 | 72382;72383;72384 | chr2:178566271;178566270;178566269 | chr2:179430998;179430997;179430996 |
N2B | 17556 | 52891;52892;52893 | chr2:178566271;178566270;178566269 | chr2:179430998;179430997;179430996 |
Novex-1 | 17681 | 53266;53267;53268 | chr2:178566271;178566270;178566269 | chr2:179430998;179430997;179430996 |
Novex-2 | 17748 | 53467;53468;53469 | chr2:178566271;178566270;178566269 | chr2:179430998;179430997;179430996 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs372537578 | -0.616 | 0.001 | N | 0.105 | 0.085 | None | gnomAD-2.1.1 | 3.92E-05 | None | None | None | None | N | None | 3.71993E-04 | 5.66E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs372537578 | -0.616 | 0.001 | N | 0.105 | 0.085 | None | gnomAD-3.1.2 | 9.2E-05 | None | None | None | None | N | None | 3.37773E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs372537578 | -0.616 | 0.001 | N | 0.105 | 0.085 | None | gnomAD-4.0.0 | 1.67329E-05 | None | None | None | None | N | None | 2.93701E-04 | 3.33511E-05 | None | 0 | 0 | None | 0 | 0 | 1.69532E-06 | 0 | 1.60128E-05 |
T/K | rs3731746 | -0.677 | 0.579 | N | 0.445 | 0.22 | 0.377799810692 | gnomAD-2.1.1 | 4.42E-05 | None | None | None | None | N | None | 0 | 2.0284E-04 | None | 0 | 0 | None | 0 | None | 0 | 2.66E-05 | 1.65453E-04 |
T/K | rs3731746 | -0.677 | 0.579 | N | 0.445 | 0.22 | 0.377799810692 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.78469E-04 |
T/K | rs3731746 | -0.677 | 0.579 | N | 0.445 | 0.22 | 0.377799810692 | gnomAD-4.0.0 | 3.28478E-05 | None | None | None | None | N | None | 2.66894E-05 | 1.00037E-04 | None | 0 | 0 | None | 0 | 0 | 3.56023E-05 | 0 | 4.80231E-05 |
T/M | rs3731746 | -0.031 | 0.914 | N | 0.476 | 0.291 | None | gnomAD-2.1.1 | 2.33214E-01 | None | None | None | None | N | None | 3.36793E-01 | 1.85994E-01 | None | 2.28107E-01 | 6.12878E-01 | None | 3.03412E-01 | None | 1.71279E-01 | 1.66019E-01 | 2.08696E-01 |
T/M | rs3731746 | -0.031 | 0.914 | N | 0.476 | 0.291 | None | gnomAD-3.1.2 | 2.3958E-01 | None | None | None | None | N | None | 3.37068E-01 | 1.8622E-01 | 4.81319E-01 | 2.28374E-01 | 6.13769E-01 | None | 1.81681E-01 | 1.83544E-01 | 1.66353E-01 | 3.06131E-01 | 2.22701E-01 |
T/M | rs3731746 | -0.031 | 0.914 | N | 0.476 | 0.291 | None | 1000 genomes | 3.42252E-01 | None | None | None | None | N | None | 3.442E-01 | 2.061E-01 | None | None | 6.29E-01 | 1.71E-01 | None | None | None | 3.17E-01 | None |
T/M | rs3731746 | -0.031 | 0.914 | N | 0.476 | 0.291 | None | gnomAD-4.0.0 | 1.93829E-01 | None | None | None | None | N | None | 3.38459E-01 | 1.88344E-01 | None | 2.277E-01 | 6.15472E-01 | None | 1.71342E-01 | 2.28713E-01 | 1.59595E-01 | 3.00163E-01 | 2.14014E-01 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0572 | likely_benign | 0.0597 | benign | -0.731 | Destabilizing | 0.001 | N | 0.105 | neutral | N | 0.464775682 | None | None | N |
T/C | 0.3236 | likely_benign | 0.3249 | benign | -0.439 | Destabilizing | 0.836 | D | 0.466 | neutral | None | None | None | None | N |
T/D | 0.3348 | likely_benign | 0.3553 | ambiguous | 0.213 | Stabilizing | 0.593 | D | 0.455 | neutral | None | None | None | None | N |
T/E | 0.2518 | likely_benign | 0.252 | benign | 0.201 | Stabilizing | 0.418 | N | 0.445 | neutral | None | None | None | None | N |
T/F | 0.1687 | likely_benign | 0.1794 | benign | -0.857 | Destabilizing | 0.002 | N | 0.351 | neutral | None | None | None | None | N |
T/G | 0.2598 | likely_benign | 0.2781 | benign | -0.966 | Destabilizing | 0.264 | N | 0.507 | neutral | None | None | None | None | N |
T/H | 0.2567 | likely_benign | 0.2671 | benign | -1.221 | Destabilizing | 0.983 | D | 0.52 | neutral | None | None | None | None | N |
T/I | 0.0767 | likely_benign | 0.0808 | benign | -0.206 | Destabilizing | 0.001 | N | 0.178 | neutral | None | None | None | None | N |
T/K | 0.2095 | likely_benign | 0.203 | benign | -0.621 | Destabilizing | 0.579 | D | 0.445 | neutral | N | 0.514991071 | None | None | N |
T/L | 0.0622 | likely_benign | 0.0639 | benign | -0.206 | Destabilizing | 0.061 | N | 0.321 | neutral | None | None | None | None | N |
T/M | 0.0707 | likely_benign | 0.0729 | benign | -0.075 | Destabilizing | 0.914 | D | 0.476 | neutral | N | 0.501977067 | None | None | N |
T/N | 0.1099 | likely_benign | 0.1153 | benign | -0.476 | Destabilizing | 0.836 | D | 0.399 | neutral | None | None | None | None | N |
T/P | 0.0804 | likely_benign | 0.0849 | benign | -0.349 | Destabilizing | 0.794 | D | 0.472 | neutral | N | 0.485689672 | None | None | N |
T/Q | 0.2028 | likely_benign | 0.2018 | benign | -0.602 | Destabilizing | 0.836 | D | 0.487 | neutral | None | None | None | None | N |
T/R | 0.2004 | likely_benign | 0.1965 | benign | -0.442 | Destabilizing | 0.828 | D | 0.489 | neutral | D | 0.529576522 | None | None | N |
T/S | 0.0991 | likely_benign | 0.1026 | benign | -0.779 | Destabilizing | 0.101 | N | 0.283 | neutral | N | 0.484313658 | None | None | N |
T/V | 0.0632 | likely_benign | 0.0676 | benign | -0.349 | Destabilizing | 0.001 | N | 0.105 | neutral | None | None | None | None | N |
T/W | 0.5754 | likely_pathogenic | 0.593 | pathogenic | -0.804 | Destabilizing | 0.983 | D | 0.535 | neutral | None | None | None | None | N |
T/Y | 0.229 | likely_benign | 0.2413 | benign | -0.569 | Destabilizing | 0.557 | D | 0.525 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.