Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26625 | 80098;80099;80100 | chr2:178566259;178566258;178566257 | chr2:179430986;179430985;179430984 |
N2AB | 24984 | 75175;75176;75177 | chr2:178566259;178566258;178566257 | chr2:179430986;179430985;179430984 |
N2A | 24057 | 72394;72395;72396 | chr2:178566259;178566258;178566257 | chr2:179430986;179430985;179430984 |
N2B | 17560 | 52903;52904;52905 | chr2:178566259;178566258;178566257 | chr2:179430986;179430985;179430984 |
Novex-1 | 17685 | 53278;53279;53280 | chr2:178566259;178566258;178566257 | chr2:179430986;179430985;179430984 |
Novex-2 | 17752 | 53479;53480;53481 | chr2:178566259;178566258;178566257 | chr2:179430986;179430985;179430984 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1705799804 | None | 0.002 | N | 0.351 | 0.147 | 0.311079019809 | gnomAD-4.0.0 | 3.18295E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77393E-05 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0814 | likely_benign | 0.0763 | benign | -0.8 | Destabilizing | 0.047 | N | 0.305 | neutral | N | 0.486795647 | None | None | N |
T/C | 0.2708 | likely_benign | 0.2342 | benign | -0.573 | Destabilizing | 0.983 | D | 0.524 | neutral | None | None | None | None | N |
T/D | 0.4359 | ambiguous | 0.3581 | ambiguous | -0.231 | Destabilizing | 0.264 | N | 0.509 | neutral | None | None | None | None | N |
T/E | 0.3057 | likely_benign | 0.2464 | benign | -0.148 | Destabilizing | 0.228 | N | 0.484 | neutral | None | None | None | None | N |
T/F | 0.1719 | likely_benign | 0.1465 | benign | -0.676 | Destabilizing | 0.716 | D | 0.591 | neutral | None | None | None | None | N |
T/G | 0.238 | likely_benign | 0.2108 | benign | -1.132 | Destabilizing | 0.001 | N | 0.351 | neutral | None | None | None | None | N |
T/H | 0.1876 | likely_benign | 0.1654 | benign | -1.256 | Destabilizing | 0.836 | D | 0.539 | neutral | None | None | None | None | N |
T/I | 0.0982 | likely_benign | 0.0867 | benign | 0.017 | Stabilizing | 0.002 | N | 0.351 | neutral | N | 0.485696464 | None | None | N |
T/K | 0.1798 | likely_benign | 0.1573 | benign | -0.591 | Destabilizing | 0.01 | N | 0.277 | neutral | None | None | None | None | N |
T/L | 0.0839 | likely_benign | 0.0745 | benign | 0.017 | Stabilizing | 0.049 | N | 0.438 | neutral | None | None | None | None | N |
T/M | 0.0866 | likely_benign | 0.0794 | benign | 0.01 | Stabilizing | 0.061 | N | 0.378 | neutral | None | None | None | None | N |
T/N | 0.1252 | likely_benign | 0.1084 | benign | -0.83 | Destabilizing | 0.007 | N | 0.231 | neutral | N | 0.501799256 | None | None | N |
T/P | 0.6608 | likely_pathogenic | 0.5811 | pathogenic | -0.222 | Destabilizing | 0.523 | D | 0.589 | neutral | D | 0.532020285 | None | None | N |
T/Q | 0.1955 | likely_benign | 0.1658 | benign | -0.786 | Destabilizing | 0.418 | N | 0.579 | neutral | None | None | None | None | N |
T/R | 0.1562 | likely_benign | 0.1392 | benign | -0.523 | Destabilizing | 0.002 | N | 0.339 | neutral | None | None | None | None | N |
T/S | 0.0915 | likely_benign | 0.0844 | benign | -1.129 | Destabilizing | 0.003 | N | 0.207 | neutral | N | 0.472602944 | None | None | N |
T/V | 0.0959 | likely_benign | 0.0877 | benign | -0.222 | Destabilizing | 0.129 | N | 0.387 | neutral | None | None | None | None | N |
T/W | 0.5079 | ambiguous | 0.4461 | ambiguous | -0.696 | Destabilizing | 0.983 | D | 0.555 | neutral | None | None | None | None | N |
T/Y | 0.2252 | likely_benign | 0.1959 | benign | -0.398 | Destabilizing | 0.836 | D | 0.556 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.