Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26631 | 80116;80117;80118 | chr2:178566241;178566240;178566239 | chr2:179430968;179430967;179430966 |
N2AB | 24990 | 75193;75194;75195 | chr2:178566241;178566240;178566239 | chr2:179430968;179430967;179430966 |
N2A | 24063 | 72412;72413;72414 | chr2:178566241;178566240;178566239 | chr2:179430968;179430967;179430966 |
N2B | 17566 | 52921;52922;52923 | chr2:178566241;178566240;178566239 | chr2:179430968;179430967;179430966 |
Novex-1 | 17691 | 53296;53297;53298 | chr2:178566241;178566240;178566239 | chr2:179430968;179430967;179430966 |
Novex-2 | 17758 | 53497;53498;53499 | chr2:178566241;178566240;178566239 | chr2:179430968;179430967;179430966 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.056 | N | 0.352 | 0.309 | 0.451882325854 | gnomAD-4.0.0 | 1.59145E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85868E-06 | 0 | 0 |
G/S | rs1705788431 | None | 0.805 | N | 0.445 | 0.207 | 0.200317383148 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
G/S | rs1705788431 | None | 0.805 | N | 0.445 | 0.207 | 0.200317383148 | gnomAD-4.0.0 | 2.56255E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39339E-06 | 0 | 2.84527E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1477 | likely_benign | 0.1519 | benign | -0.307 | Destabilizing | 0.204 | N | 0.31 | neutral | N | 0.499674902 | None | None | N |
G/C | 0.2555 | likely_benign | 0.2528 | benign | -0.953 | Destabilizing | 0.999 | D | 0.665 | neutral | D | 0.528497885 | None | None | N |
G/D | 0.2265 | likely_benign | 0.2271 | benign | -0.7 | Destabilizing | 0.935 | D | 0.501 | neutral | N | 0.512124125 | None | None | N |
G/E | 0.2202 | likely_benign | 0.2199 | benign | -0.863 | Destabilizing | 0.975 | D | 0.527 | neutral | None | None | None | None | N |
G/F | 0.624 | likely_pathogenic | 0.6236 | pathogenic | -1.042 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
G/H | 0.4472 | ambiguous | 0.4557 | ambiguous | -0.484 | Destabilizing | 0.997 | D | 0.617 | neutral | None | None | None | None | N |
G/I | 0.3179 | likely_benign | 0.3136 | benign | -0.501 | Destabilizing | 0.987 | D | 0.679 | prob.neutral | None | None | None | None | N |
G/K | 0.3886 | ambiguous | 0.3906 | ambiguous | -0.868 | Destabilizing | 0.845 | D | 0.505 | neutral | None | None | None | None | N |
G/L | 0.4674 | ambiguous | 0.4757 | ambiguous | -0.501 | Destabilizing | 0.975 | D | 0.627 | neutral | None | None | None | None | N |
G/M | 0.4436 | ambiguous | 0.4462 | ambiguous | -0.641 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
G/N | 0.26 | likely_benign | 0.2656 | benign | -0.52 | Destabilizing | 0.253 | N | 0.322 | neutral | None | None | None | None | N |
G/P | 0.8355 | likely_pathogenic | 0.8414 | pathogenic | -0.407 | Destabilizing | 0.987 | D | 0.6 | neutral | None | None | None | None | N |
G/Q | 0.3582 | ambiguous | 0.3646 | ambiguous | -0.807 | Destabilizing | 0.975 | D | 0.599 | neutral | None | None | None | None | N |
G/R | 0.3336 | likely_benign | 0.3349 | benign | -0.405 | Destabilizing | 0.056 | N | 0.352 | neutral | N | 0.519684815 | None | None | N |
G/S | 0.1197 | likely_benign | 0.1262 | benign | -0.632 | Destabilizing | 0.805 | D | 0.445 | neutral | N | 0.483167433 | None | None | N |
G/T | 0.1642 | likely_benign | 0.1637 | benign | -0.731 | Destabilizing | 0.975 | D | 0.526 | neutral | None | None | None | None | N |
G/V | 0.2179 | likely_benign | 0.2139 | benign | -0.407 | Destabilizing | 0.967 | D | 0.655 | neutral | N | 0.507718382 | None | None | N |
G/W | 0.4867 | ambiguous | 0.4752 | ambiguous | -1.174 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
G/Y | 0.4651 | ambiguous | 0.4609 | ambiguous | -0.849 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.