Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26632 | 80119;80120;80121 | chr2:178566238;178566237;178566236 | chr2:179430965;179430964;179430963 |
N2AB | 24991 | 75196;75197;75198 | chr2:178566238;178566237;178566236 | chr2:179430965;179430964;179430963 |
N2A | 24064 | 72415;72416;72417 | chr2:178566238;178566237;178566236 | chr2:179430965;179430964;179430963 |
N2B | 17567 | 52924;52925;52926 | chr2:178566238;178566237;178566236 | chr2:179430965;179430964;179430963 |
Novex-1 | 17692 | 53299;53300;53301 | chr2:178566238;178566237;178566236 | chr2:179430965;179430964;179430963 |
Novex-2 | 17759 | 53500;53501;53502 | chr2:178566238;178566237;178566236 | chr2:179430965;179430964;179430963 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.722 | D | 0.511 | 0.372 | 0.411265580357 | gnomAD-4.0.0 | 1.20035E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31253E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1034 | likely_benign | 0.0927 | benign | -0.051 | Destabilizing | 0.034 | N | 0.324 | neutral | D | 0.527864368 | None | None | N |
E/C | 0.6071 | likely_pathogenic | 0.5391 | ambiguous | -0.348 | Destabilizing | 0.996 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/D | 0.0748 | likely_benign | 0.0696 | benign | -0.347 | Destabilizing | 0.003 | N | 0.243 | neutral | N | 0.492250285 | None | None | N |
E/F | 0.5062 | ambiguous | 0.4282 | ambiguous | 0.003 | Stabilizing | 0.987 | D | 0.647 | neutral | None | None | None | None | N |
E/G | 0.1213 | likely_benign | 0.1065 | benign | -0.174 | Destabilizing | 0.722 | D | 0.513 | neutral | N | 0.498622932 | None | None | N |
E/H | 0.2933 | likely_benign | 0.2555 | benign | 0.692 | Stabilizing | 0.996 | D | 0.547 | neutral | None | None | None | None | N |
E/I | 0.1525 | likely_benign | 0.1372 | benign | 0.221 | Stabilizing | 0.961 | D | 0.652 | neutral | None | None | None | None | N |
E/K | 0.115 | likely_benign | 0.1058 | benign | 0.377 | Stabilizing | 0.722 | D | 0.511 | neutral | D | 0.522783835 | None | None | N |
E/L | 0.227 | likely_benign | 0.1914 | benign | 0.221 | Stabilizing | 0.923 | D | 0.567 | neutral | None | None | None | None | N |
E/M | 0.2654 | likely_benign | 0.2408 | benign | -0.09 | Destabilizing | 0.996 | D | 0.632 | neutral | None | None | None | None | N |
E/N | 0.122 | likely_benign | 0.1052 | benign | 0.016 | Stabilizing | 0.858 | D | 0.497 | neutral | None | None | None | None | N |
E/P | 0.3058 | likely_benign | 0.2639 | benign | 0.148 | Stabilizing | 0.961 | D | 0.563 | neutral | None | None | None | None | N |
E/Q | 0.1121 | likely_benign | 0.1047 | benign | 0.046 | Stabilizing | 0.901 | D | 0.489 | neutral | N | 0.512876273 | None | None | N |
E/R | 0.2049 | likely_benign | 0.1818 | benign | 0.682 | Stabilizing | 0.961 | D | 0.545 | neutral | None | None | None | None | N |
E/S | 0.1134 | likely_benign | 0.1011 | benign | -0.104 | Destabilizing | 0.633 | D | 0.49 | neutral | None | None | None | None | N |
E/T | 0.1195 | likely_benign | 0.1093 | benign | 0.013 | Stabilizing | 0.775 | D | 0.506 | neutral | None | None | None | None | N |
E/V | 0.1102 | likely_benign | 0.1005 | benign | 0.148 | Stabilizing | 0.901 | D | 0.501 | neutral | N | 0.481689361 | None | None | N |
E/W | 0.791 | likely_pathogenic | 0.7214 | pathogenic | 0.08 | Stabilizing | 0.996 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/Y | 0.3773 | ambiguous | 0.3176 | benign | 0.233 | Stabilizing | 0.987 | D | 0.624 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.