Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26641 | 80146;80147;80148 | chr2:178566211;178566210;178566209 | chr2:179430938;179430937;179430936 |
N2AB | 25000 | 75223;75224;75225 | chr2:178566211;178566210;178566209 | chr2:179430938;179430937;179430936 |
N2A | 24073 | 72442;72443;72444 | chr2:178566211;178566210;178566209 | chr2:179430938;179430937;179430936 |
N2B | 17576 | 52951;52952;52953 | chr2:178566211;178566210;178566209 | chr2:179430938;179430937;179430936 |
Novex-1 | 17701 | 53326;53327;53328 | chr2:178566211;178566210;178566209 | chr2:179430938;179430937;179430936 |
Novex-2 | 17768 | 53527;53528;53529 | chr2:178566211;178566210;178566209 | chr2:179430938;179430937;179430936 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs745463486 | 0.102 | 0.801 | N | 0.415 | 0.158 | 0.253205268125 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
K/N | rs745463486 | 0.102 | 0.801 | N | 0.415 | 0.158 | 0.253205268125 | gnomAD-4.0.0 | 1.3685E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79905E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3186 | likely_benign | 0.2856 | benign | -0.15 | Destabilizing | 0.525 | D | 0.473 | neutral | None | None | None | None | N |
K/C | 0.6233 | likely_pathogenic | 0.5673 | pathogenic | -0.431 | Destabilizing | 0.998 | D | 0.535 | neutral | None | None | None | None | N |
K/D | 0.5058 | ambiguous | 0.4591 | ambiguous | 0.273 | Stabilizing | 0.842 | D | 0.499 | neutral | None | None | None | None | N |
K/E | 0.171 | likely_benign | 0.1512 | benign | 0.338 | Stabilizing | 0.625 | D | 0.409 | neutral | N | 0.475568679 | None | None | N |
K/F | 0.7562 | likely_pathogenic | 0.6977 | pathogenic | -0.119 | Destabilizing | 0.949 | D | 0.556 | neutral | None | None | None | None | N |
K/G | 0.4468 | ambiguous | 0.3958 | ambiguous | -0.419 | Destabilizing | 0.842 | D | 0.529 | neutral | None | None | None | None | N |
K/H | 0.2837 | likely_benign | 0.2608 | benign | -0.575 | Destabilizing | 0.974 | D | 0.5 | neutral | None | None | None | None | N |
K/I | 0.3474 | ambiguous | 0.3035 | benign | 0.5 | Stabilizing | 0.904 | D | 0.553 | neutral | None | None | None | None | N |
K/L | 0.3704 | ambiguous | 0.3245 | benign | 0.5 | Stabilizing | 0.525 | D | 0.545 | neutral | None | None | None | None | N |
K/M | 0.217 | likely_benign | 0.1992 | benign | 0.107 | Stabilizing | 0.267 | N | 0.379 | neutral | D | 0.531270033 | None | None | N |
K/N | 0.3185 | likely_benign | 0.2844 | benign | -0.038 | Destabilizing | 0.801 | D | 0.415 | neutral | N | 0.425371932 | None | None | N |
K/P | 0.6938 | likely_pathogenic | 0.6485 | pathogenic | 0.313 | Stabilizing | 0.991 | D | 0.506 | neutral | None | None | None | None | N |
K/Q | 0.1359 | likely_benign | 0.1258 | benign | -0.095 | Destabilizing | 0.801 | D | 0.487 | neutral | N | 0.45552148 | None | None | N |
K/R | 0.0873 | likely_benign | 0.0875 | benign | -0.132 | Destabilizing | 0.005 | N | 0.244 | neutral | N | 0.471587011 | None | None | N |
K/S | 0.3387 | likely_benign | 0.2915 | benign | -0.607 | Destabilizing | 0.172 | N | 0.249 | neutral | None | None | None | None | N |
K/T | 0.1364 | likely_benign | 0.1225 | benign | -0.358 | Destabilizing | 0.051 | N | 0.336 | neutral | N | 0.378658207 | None | None | N |
K/V | 0.3153 | likely_benign | 0.2793 | benign | 0.313 | Stabilizing | 0.728 | D | 0.543 | neutral | None | None | None | None | N |
K/W | 0.7045 | likely_pathogenic | 0.6599 | pathogenic | -0.099 | Destabilizing | 0.998 | D | 0.555 | neutral | None | None | None | None | N |
K/Y | 0.5635 | ambiguous | 0.5175 | ambiguous | 0.235 | Stabilizing | 0.991 | D | 0.549 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.