Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26644 | 80155;80156;80157 | chr2:178566202;178566201;178566200 | chr2:179430929;179430928;179430927 |
N2AB | 25003 | 75232;75233;75234 | chr2:178566202;178566201;178566200 | chr2:179430929;179430928;179430927 |
N2A | 24076 | 72451;72452;72453 | chr2:178566202;178566201;178566200 | chr2:179430929;179430928;179430927 |
N2B | 17579 | 52960;52961;52962 | chr2:178566202;178566201;178566200 | chr2:179430929;179430928;179430927 |
Novex-1 | 17704 | 53335;53336;53337 | chr2:178566202;178566201;178566200 | chr2:179430929;179430928;179430927 |
Novex-2 | 17771 | 53536;53537;53538 | chr2:178566202;178566201;178566200 | chr2:179430929;179430928;179430927 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | None | None | 0.815 | N | 0.397 | 0.212 | 0.338834610459 | gnomAD-4.0.0 | 1.59151E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77423E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2376 | likely_benign | 0.2092 | benign | -0.511 | Destabilizing | 0.742 | D | 0.496 | neutral | None | None | None | None | N |
N/C | 0.2321 | likely_benign | 0.2154 | benign | 0.082 | Stabilizing | 0.996 | D | 0.587 | neutral | None | None | None | None | N |
N/D | 0.1635 | likely_benign | 0.1436 | benign | 0.304 | Stabilizing | 0.003 | N | 0.139 | neutral | N | 0.397185253 | None | None | N |
N/E | 0.5159 | ambiguous | 0.4524 | ambiguous | 0.361 | Stabilizing | 0.037 | N | 0.186 | neutral | None | None | None | None | N |
N/F | 0.4967 | ambiguous | 0.4589 | ambiguous | -0.562 | Destabilizing | 0.835 | D | 0.563 | neutral | None | None | None | None | N |
N/G | 0.2402 | likely_benign | 0.2271 | benign | -0.767 | Destabilizing | 0.742 | D | 0.324 | neutral | None | None | None | None | N |
N/H | 0.1122 | likely_benign | 0.1102 | benign | -0.453 | Destabilizing | 0.884 | D | 0.469 | neutral | N | 0.509086606 | None | None | N |
N/I | 0.318 | likely_benign | 0.2834 | benign | 0.109 | Stabilizing | 0.884 | D | 0.565 | neutral | N | 0.490674204 | None | None | N |
N/K | 0.4682 | ambiguous | 0.4217 | ambiguous | 0.082 | Stabilizing | 0.684 | D | 0.352 | neutral | N | 0.469912143 | None | None | N |
N/L | 0.2773 | likely_benign | 0.2538 | benign | 0.109 | Stabilizing | 0.835 | D | 0.525 | neutral | None | None | None | None | N |
N/M | 0.3993 | ambiguous | 0.3652 | ambiguous | 0.113 | Stabilizing | 0.996 | D | 0.546 | neutral | None | None | None | None | N |
N/P | 0.6386 | likely_pathogenic | 0.6065 | pathogenic | -0.07 | Destabilizing | 0.984 | D | 0.559 | neutral | None | None | None | None | N |
N/Q | 0.3798 | ambiguous | 0.3431 | ambiguous | -0.344 | Destabilizing | 0.91 | D | 0.423 | neutral | None | None | None | None | N |
N/R | 0.4532 | ambiguous | 0.4202 | ambiguous | 0.102 | Stabilizing | 0.91 | D | 0.427 | neutral | None | None | None | None | N |
N/S | 0.0787 | likely_benign | 0.0776 | benign | -0.442 | Destabilizing | 0.684 | D | 0.349 | neutral | N | 0.385506822 | None | None | N |
N/T | 0.1378 | likely_benign | 0.1268 | benign | -0.21 | Destabilizing | 0.815 | D | 0.397 | neutral | N | 0.44796079 | None | None | N |
N/V | 0.3232 | likely_benign | 0.2879 | benign | -0.07 | Destabilizing | 0.91 | D | 0.533 | neutral | None | None | None | None | N |
N/W | 0.7508 | likely_pathogenic | 0.7335 | pathogenic | -0.469 | Destabilizing | 0.987 | D | 0.585 | neutral | None | None | None | None | N |
N/Y | 0.1663 | likely_benign | 0.1557 | benign | -0.198 | Destabilizing | 0.015 | N | 0.376 | neutral | N | 0.453059965 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.