Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26663 | 80212;80213;80214 | chr2:178566145;178566144;178566143 | chr2:179430872;179430871;179430870 |
N2AB | 25022 | 75289;75290;75291 | chr2:178566145;178566144;178566143 | chr2:179430872;179430871;179430870 |
N2A | 24095 | 72508;72509;72510 | chr2:178566145;178566144;178566143 | chr2:179430872;179430871;179430870 |
N2B | 17598 | 53017;53018;53019 | chr2:178566145;178566144;178566143 | chr2:179430872;179430871;179430870 |
Novex-1 | 17723 | 53392;53393;53394 | chr2:178566145;178566144;178566143 | chr2:179430872;179430871;179430870 |
Novex-2 | 17790 | 53593;53594;53595 | chr2:178566145;178566144;178566143 | chr2:179430872;179430871;179430870 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.837 | 0.299 | 0.468253365638 | gnomAD-4.0.0 | 5.47419E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29675E-06 | 0 | 1.65695E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9039 | likely_pathogenic | 0.8873 | pathogenic | -2.506 | Highly Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
L/C | 0.8129 | likely_pathogenic | 0.7959 | pathogenic | -1.808 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -2.568 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/E | 0.9979 | likely_pathogenic | 0.9974 | pathogenic | -2.331 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/F | 0.7607 | likely_pathogenic | 0.6906 | pathogenic | -1.523 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.478253367 | None | None | N |
L/G | 0.987 | likely_pathogenic | 0.9851 | pathogenic | -3.077 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/H | 0.9947 | likely_pathogenic | 0.9932 | pathogenic | -2.508 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | N | 0.502486915 | None | None | N |
L/I | 0.1604 | likely_benign | 0.1439 | benign | -0.859 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | N | 0.489531614 | None | None | N |
L/K | 0.9966 | likely_pathogenic | 0.9961 | pathogenic | -1.907 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/M | 0.3383 | likely_benign | 0.3049 | benign | -0.785 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
L/N | 0.9975 | likely_pathogenic | 0.9972 | pathogenic | -2.265 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
L/P | 0.9977 | likely_pathogenic | 0.9968 | pathogenic | -1.388 | Destabilizing | 1.0 | D | 0.869 | deleterious | N | 0.502486915 | None | None | N |
L/Q | 0.9879 | likely_pathogenic | 0.9848 | pathogenic | -2.094 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
L/R | 0.9916 | likely_pathogenic | 0.9905 | pathogenic | -1.674 | Destabilizing | 1.0 | D | 0.867 | deleterious | N | 0.502486915 | None | None | N |
L/S | 0.9901 | likely_pathogenic | 0.988 | pathogenic | -3.021 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/T | 0.953 | likely_pathogenic | 0.9437 | pathogenic | -2.622 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
L/V | 0.1447 | likely_benign | 0.1337 | benign | -1.388 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | N | 0.45382153 | None | None | N |
L/W | 0.9837 | likely_pathogenic | 0.9797 | pathogenic | -1.886 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
L/Y | 0.9864 | likely_pathogenic | 0.983 | pathogenic | -1.585 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.