Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26666 | 80221;80222;80223 | chr2:178566136;178566135;178566134 | chr2:179430863;179430862;179430861 |
N2AB | 25025 | 75298;75299;75300 | chr2:178566136;178566135;178566134 | chr2:179430863;179430862;179430861 |
N2A | 24098 | 72517;72518;72519 | chr2:178566136;178566135;178566134 | chr2:179430863;179430862;179430861 |
N2B | 17601 | 53026;53027;53028 | chr2:178566136;178566135;178566134 | chr2:179430863;179430862;179430861 |
Novex-1 | 17726 | 53401;53402;53403 | chr2:178566136;178566135;178566134 | chr2:179430863;179430862;179430861 |
Novex-2 | 17793 | 53602;53603;53604 | chr2:178566136;178566135;178566134 | chr2:179430863;179430862;179430861 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs766614271 | -0.76 | 0.967 | N | 0.729 | 0.543 | 0.507093260865 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.6715E-04 | None | 0 | None | 0 | 0 | 0 |
E/G | rs766614271 | -0.76 | 0.967 | N | 0.729 | 0.543 | 0.507093260865 | gnomAD-4.0.0 | 3.42129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.25995E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2327 | likely_benign | 0.2254 | benign | -0.53 | Destabilizing | 0.805 | D | 0.644 | neutral | N | 0.49116374 | None | None | N |
E/C | 0.8357 | likely_pathogenic | 0.8154 | pathogenic | 0.012 | Stabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
E/D | 0.2738 | likely_benign | 0.2619 | benign | -0.797 | Destabilizing | 0.892 | D | 0.49 | neutral | N | 0.500900657 | None | None | N |
E/F | 0.8596 | likely_pathogenic | 0.8339 | pathogenic | -0.685 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
E/G | 0.3237 | likely_benign | 0.3104 | benign | -0.779 | Destabilizing | 0.967 | D | 0.729 | prob.delet. | N | 0.513017431 | None | None | N |
E/H | 0.5485 | ambiguous | 0.5042 | ambiguous | -0.97 | Destabilizing | 0.997 | D | 0.743 | deleterious | None | None | None | None | N |
E/I | 0.4048 | ambiguous | 0.3896 | ambiguous | 0.107 | Stabilizing | 0.987 | D | 0.832 | deleterious | None | None | None | None | N |
E/K | 0.252 | likely_benign | 0.2258 | benign | -0.007 | Destabilizing | 0.805 | D | 0.593 | neutral | N | 0.518762095 | None | None | N |
E/L | 0.5486 | ambiguous | 0.5289 | ambiguous | 0.107 | Stabilizing | 0.975 | D | 0.753 | deleterious | None | None | None | None | N |
E/M | 0.5194 | ambiguous | 0.5078 | ambiguous | 0.558 | Stabilizing | 0.997 | D | 0.807 | deleterious | None | None | None | None | N |
E/N | 0.4111 | ambiguous | 0.3846 | ambiguous | -0.253 | Destabilizing | 0.975 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/P | 0.9923 | likely_pathogenic | 0.9906 | pathogenic | -0.084 | Destabilizing | 0.987 | D | 0.778 | deleterious | None | None | None | None | N |
E/Q | 0.1278 | likely_benign | 0.1211 | benign | -0.223 | Destabilizing | 0.099 | N | 0.268 | neutral | N | 0.509817325 | None | None | N |
E/R | 0.3972 | ambiguous | 0.3704 | ambiguous | -0.031 | Destabilizing | 0.95 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/S | 0.2688 | likely_benign | 0.2554 | benign | -0.462 | Destabilizing | 0.845 | D | 0.652 | neutral | None | None | None | None | N |
E/T | 0.2384 | likely_benign | 0.2192 | benign | -0.259 | Destabilizing | 0.975 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/V | 0.2257 | likely_benign | 0.2184 | benign | -0.084 | Destabilizing | 0.967 | D | 0.784 | deleterious | N | 0.494063802 | None | None | N |
E/W | 0.9452 | likely_pathogenic | 0.9349 | pathogenic | -0.635 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
E/Y | 0.7932 | likely_pathogenic | 0.7621 | pathogenic | -0.463 | Destabilizing | 0.987 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.