Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26671 | 80236;80237;80238 | chr2:178566121;178566120;178566119 | chr2:179430848;179430847;179430846 |
N2AB | 25030 | 75313;75314;75315 | chr2:178566121;178566120;178566119 | chr2:179430848;179430847;179430846 |
N2A | 24103 | 72532;72533;72534 | chr2:178566121;178566120;178566119 | chr2:179430848;179430847;179430846 |
N2B | 17606 | 53041;53042;53043 | chr2:178566121;178566120;178566119 | chr2:179430848;179430847;179430846 |
Novex-1 | 17731 | 53416;53417;53418 | chr2:178566121;178566120;178566119 | chr2:179430848;179430847;179430846 |
Novex-2 | 17798 | 53617;53618;53619 | chr2:178566121;178566120;178566119 | chr2:179430848;179430847;179430846 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs371983237 | -0.375 | 0.667 | N | 0.46 | 0.378 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0834 | likely_benign | 0.0848 | benign | -0.34 | Destabilizing | 0.055 | N | 0.314 | neutral | N | 0.517820733 | None | None | N |
S/C | 0.0774 | likely_benign | 0.083 | benign | -0.232 | Destabilizing | 0.909 | D | 0.507 | neutral | None | None | None | None | N |
S/D | 0.4461 | ambiguous | 0.3971 | ambiguous | 0.046 | Stabilizing | 0.272 | N | 0.356 | neutral | None | None | None | None | N |
S/E | 0.4173 | ambiguous | 0.3717 | ambiguous | -0.057 | Destabilizing | 0.272 | N | 0.353 | neutral | None | None | None | None | N |
S/F | 0.1588 | likely_benign | 0.1503 | benign | -0.967 | Destabilizing | 0.726 | D | 0.627 | neutral | None | None | None | None | N |
S/G | 0.1071 | likely_benign | 0.1109 | benign | -0.436 | Destabilizing | 0.272 | N | 0.333 | neutral | None | None | None | None | N |
S/H | 0.3029 | likely_benign | 0.2749 | benign | -0.968 | Destabilizing | 0.968 | D | 0.503 | neutral | None | None | None | None | N |
S/I | 0.113 | likely_benign | 0.1113 | benign | -0.216 | Destabilizing | 0.396 | N | 0.568 | neutral | None | None | None | None | N |
S/K | 0.5147 | ambiguous | 0.4738 | ambiguous | -0.467 | Destabilizing | 0.272 | N | 0.353 | neutral | None | None | None | None | N |
S/L | 0.0947 | likely_benign | 0.0926 | benign | -0.216 | Destabilizing | 0.124 | N | 0.557 | neutral | N | 0.501407636 | None | None | N |
S/M | 0.1391 | likely_benign | 0.1382 | benign | 0.078 | Stabilizing | 0.909 | D | 0.51 | neutral | None | None | None | None | N |
S/N | 0.1216 | likely_benign | 0.1115 | benign | -0.156 | Destabilizing | 0.272 | N | 0.386 | neutral | None | None | None | None | N |
S/P | 0.7271 | likely_pathogenic | 0.6652 | pathogenic | -0.23 | Destabilizing | 0.667 | D | 0.46 | neutral | N | 0.51976538 | None | None | N |
S/Q | 0.3544 | ambiguous | 0.3242 | benign | -0.442 | Destabilizing | 0.726 | D | 0.427 | neutral | None | None | None | None | N |
S/R | 0.483 | ambiguous | 0.434 | ambiguous | -0.242 | Destabilizing | 0.567 | D | 0.468 | neutral | None | None | None | None | N |
S/T | 0.0693 | likely_benign | 0.0668 | benign | -0.269 | Destabilizing | None | N | 0.17 | neutral | N | 0.453617326 | None | None | N |
S/V | 0.1228 | likely_benign | 0.1215 | benign | -0.23 | Destabilizing | 0.157 | N | 0.545 | neutral | None | None | None | None | N |
S/W | 0.3547 | ambiguous | 0.3453 | ambiguous | -0.976 | Destabilizing | 0.968 | D | 0.675 | prob.neutral | None | None | None | None | N |
S/Y | 0.184 | likely_benign | 0.1749 | benign | -0.695 | Destabilizing | 0.726 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.