Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26685 | 80278;80279;80280 | chr2:178566079;178566078;178566077 | chr2:179430806;179430805;179430804 |
N2AB | 25044 | 75355;75356;75357 | chr2:178566079;178566078;178566077 | chr2:179430806;179430805;179430804 |
N2A | 24117 | 72574;72575;72576 | chr2:178566079;178566078;178566077 | chr2:179430806;179430805;179430804 |
N2B | 17620 | 53083;53084;53085 | chr2:178566079;178566078;178566077 | chr2:179430806;179430805;179430804 |
Novex-1 | 17745 | 53458;53459;53460 | chr2:178566079;178566078;178566077 | chr2:179430806;179430805;179430804 |
Novex-2 | 17812 | 53659;53660;53661 | chr2:178566079;178566078;178566077 | chr2:179430806;179430805;179430804 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs773930240 | -2.06 | 1.0 | N | 0.845 | 0.473 | 0.467247493403 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
G/E | rs773930240 | -2.06 | 1.0 | N | 0.845 | 0.473 | 0.467247493403 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4531 | ambiguous | 0.4248 | ambiguous | -0.9 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.470354826 | None | None | N |
G/C | 0.7962 | likely_pathogenic | 0.7474 | pathogenic | -1.32 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
G/D | 0.943 | likely_pathogenic | 0.9248 | pathogenic | -2.177 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
G/E | 0.9544 | likely_pathogenic | 0.9329 | pathogenic | -2.181 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | N | 0.51279108 | None | None | N |
G/F | 0.97 | likely_pathogenic | 0.9511 | pathogenic | -1.121 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
G/H | 0.9763 | likely_pathogenic | 0.9635 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
G/I | 0.9684 | likely_pathogenic | 0.9527 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
G/K | 0.988 | likely_pathogenic | 0.979 | pathogenic | -1.312 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
G/L | 0.9279 | likely_pathogenic | 0.903 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
G/M | 0.9606 | likely_pathogenic | 0.9438 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
G/N | 0.9287 | likely_pathogenic | 0.9115 | pathogenic | -1.242 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
G/P | 0.9969 | likely_pathogenic | 0.9962 | pathogenic | -0.539 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
G/Q | 0.9556 | likely_pathogenic | 0.9347 | pathogenic | -1.419 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
G/R | 0.9706 | likely_pathogenic | 0.952 | pathogenic | -1.046 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.514312018 | None | None | N |
G/S | 0.3053 | likely_benign | 0.2848 | benign | -1.449 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
G/T | 0.8572 | likely_pathogenic | 0.8036 | pathogenic | -1.387 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
G/V | 0.942 | likely_pathogenic | 0.9204 | pathogenic | -0.539 | Destabilizing | 1.0 | D | 0.858 | deleterious | N | 0.515325976 | None | None | N |
G/W | 0.9645 | likely_pathogenic | 0.9416 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
G/Y | 0.961 | likely_pathogenic | 0.9379 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.