Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26689 | 80290;80291;80292 | chr2:178566067;178566066;178566065 | chr2:179430794;179430793;179430792 |
N2AB | 25048 | 75367;75368;75369 | chr2:178566067;178566066;178566065 | chr2:179430794;179430793;179430792 |
N2A | 24121 | 72586;72587;72588 | chr2:178566067;178566066;178566065 | chr2:179430794;179430793;179430792 |
N2B | 17624 | 53095;53096;53097 | chr2:178566067;178566066;178566065 | chr2:179430794;179430793;179430792 |
Novex-1 | 17749 | 53470;53471;53472 | chr2:178566067;178566066;178566065 | chr2:179430794;179430793;179430792 |
Novex-2 | 17816 | 53671;53672;53673 | chr2:178566067;178566066;178566065 | chr2:179430794;179430793;179430792 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1289700659 | 0.38 | 0.014 | N | 0.247 | 0.174 | 0.136095386433 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/D | rs1289700659 | 0.38 | 0.014 | N | 0.247 | 0.174 | 0.136095386433 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/D | rs1289700659 | 0.38 | 0.014 | N | 0.247 | 0.174 | 0.136095386433 | gnomAD-4.0.0 | 6.57237E-06 | None | None | None | None | I | None | 2.41196E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2637 | likely_benign | 0.2637 | benign | -0.293 | Destabilizing | 0.86 | D | 0.516 | neutral | None | None | None | None | I |
N/C | 0.2644 | likely_benign | 0.2809 | benign | 0.286 | Stabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | I |
N/D | 0.1736 | likely_benign | 0.1672 | benign | 0.045 | Stabilizing | 0.014 | N | 0.247 | neutral | N | 0.492260567 | None | None | I |
N/E | 0.4052 | ambiguous | 0.3891 | ambiguous | 0.019 | Stabilizing | 0.754 | D | 0.513 | neutral | None | None | None | None | I |
N/F | 0.5202 | ambiguous | 0.504 | ambiguous | -0.601 | Destabilizing | 0.993 | D | 0.677 | prob.neutral | None | None | None | None | I |
N/G | 0.2713 | likely_benign | 0.2777 | benign | -0.481 | Destabilizing | 0.86 | D | 0.496 | neutral | None | None | None | None | I |
N/H | 0.1094 | likely_benign | 0.112 | benign | -0.47 | Destabilizing | 0.97 | D | 0.516 | neutral | N | 0.49264718 | None | None | I |
N/I | 0.3105 | likely_benign | 0.3043 | benign | 0.116 | Stabilizing | 0.97 | D | 0.688 | prob.neutral | N | 0.518802831 | None | None | I |
N/K | 0.2563 | likely_benign | 0.2429 | benign | 0.027 | Stabilizing | 0.698 | D | 0.507 | neutral | N | 0.509808964 | None | None | I |
N/L | 0.2921 | likely_benign | 0.2932 | benign | 0.116 | Stabilizing | 0.978 | D | 0.572 | neutral | None | None | None | None | I |
N/M | 0.3458 | ambiguous | 0.3426 | ambiguous | 0.357 | Stabilizing | 0.998 | D | 0.662 | neutral | None | None | None | None | I |
N/P | 0.8356 | likely_pathogenic | 0.8466 | pathogenic | 0.007 | Stabilizing | 0.978 | D | 0.663 | neutral | None | None | None | None | I |
N/Q | 0.2826 | likely_benign | 0.2762 | benign | -0.435 | Destabilizing | 0.356 | N | 0.257 | neutral | None | None | None | None | I |
N/R | 0.337 | likely_benign | 0.3258 | benign | 0.083 | Stabilizing | 0.956 | D | 0.502 | neutral | None | None | None | None | I |
N/S | 0.1301 | likely_benign | 0.1259 | benign | -0.212 | Destabilizing | 0.822 | D | 0.529 | neutral | N | 0.477732476 | None | None | I |
N/T | 0.2119 | likely_benign | 0.2062 | benign | -0.095 | Destabilizing | 0.822 | D | 0.519 | neutral | N | 0.48572142 | None | None | I |
N/V | 0.3036 | likely_benign | 0.3029 | benign | 0.007 | Stabilizing | 0.978 | D | 0.653 | neutral | None | None | None | None | I |
N/W | 0.7978 | likely_pathogenic | 0.7969 | pathogenic | -0.589 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | I |
N/Y | 0.1685 | likely_benign | 0.1701 | benign | -0.326 | Destabilizing | 0.99 | D | 0.675 | prob.neutral | D | 0.530919605 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.