Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26691 | 80296;80297;80298 | chr2:178566061;178566060;178566059 | chr2:179430788;179430787;179430786 |
N2AB | 25050 | 75373;75374;75375 | chr2:178566061;178566060;178566059 | chr2:179430788;179430787;179430786 |
N2A | 24123 | 72592;72593;72594 | chr2:178566061;178566060;178566059 | chr2:179430788;179430787;179430786 |
N2B | 17626 | 53101;53102;53103 | chr2:178566061;178566060;178566059 | chr2:179430788;179430787;179430786 |
Novex-1 | 17751 | 53476;53477;53478 | chr2:178566061;178566060;178566059 | chr2:179430788;179430787;179430786 |
Novex-2 | 17818 | 53677;53678;53679 | chr2:178566061;178566060;178566059 | chr2:179430788;179430787;179430786 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | None | N | 0.099 | 0.096 | 0.0297737177859 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2013 | likely_benign | 0.2355 | benign | -0.779 | Destabilizing | 0.356 | N | 0.479 | neutral | None | None | None | None | N |
A/D | 0.2007 | likely_benign | 0.1977 | benign | -0.683 | Destabilizing | 0.038 | N | 0.502 | neutral | None | None | None | None | N |
A/E | 0.1436 | likely_benign | 0.1343 | benign | -0.726 | Destabilizing | None | N | 0.295 | neutral | N | 0.410369902 | None | None | N |
A/F | 0.1654 | likely_benign | 0.1772 | benign | -0.692 | Destabilizing | None | N | 0.397 | neutral | None | None | None | None | N |
A/G | 0.1223 | likely_benign | 0.1352 | benign | -0.767 | Destabilizing | 0.024 | N | 0.297 | neutral | N | 0.462588234 | None | None | N |
A/H | 0.2172 | likely_benign | 0.232 | benign | -0.855 | Destabilizing | 0.356 | N | 0.538 | neutral | None | None | None | None | N |
A/I | 0.0885 | likely_benign | 0.0917 | benign | -0.119 | Destabilizing | None | N | 0.245 | neutral | None | None | None | None | N |
A/K | 0.2292 | likely_benign | 0.2336 | benign | -1.013 | Destabilizing | 0.038 | N | 0.423 | neutral | None | None | None | None | N |
A/L | 0.0745 | likely_benign | 0.0793 | benign | -0.119 | Destabilizing | None | N | 0.218 | neutral | None | None | None | None | N |
A/M | 0.0917 | likely_benign | 0.098 | benign | -0.262 | Destabilizing | 0.214 | N | 0.502 | neutral | None | None | None | None | N |
A/N | 0.1253 | likely_benign | 0.1403 | benign | -0.787 | Destabilizing | 0.072 | N | 0.571 | neutral | None | None | None | None | N |
A/P | 0.6566 | likely_pathogenic | 0.7163 | pathogenic | -0.22 | Destabilizing | 0.106 | N | 0.541 | neutral | D | 0.522367256 | None | None | N |
A/Q | 0.1586 | likely_benign | 0.1636 | benign | -0.908 | Destabilizing | 0.12 | N | 0.576 | neutral | None | None | None | None | N |
A/R | 0.2243 | likely_benign | 0.2239 | benign | -0.677 | Destabilizing | 0.072 | N | 0.552 | neutral | None | None | None | None | N |
A/S | 0.0764 | likely_benign | 0.0809 | benign | -1.097 | Destabilizing | 0.012 | N | 0.295 | neutral | N | 0.437919076 | None | None | N |
A/T | 0.0578 | likely_benign | 0.0585 | benign | -1.037 | Destabilizing | None | N | 0.099 | neutral | N | 0.348299936 | None | None | N |
A/V | 0.064 | likely_benign | 0.0647 | benign | -0.22 | Destabilizing | None | N | 0.12 | neutral | N | 0.402809211 | None | None | N |
A/W | 0.4689 | ambiguous | 0.4871 | ambiguous | -1.023 | Destabilizing | 0.864 | D | 0.546 | neutral | None | None | None | None | N |
A/Y | 0.2365 | likely_benign | 0.2517 | benign | -0.603 | Destabilizing | 0.038 | N | 0.607 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.