Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2670 | 8233;8234;8235 | chr2:178771319;178771318;178771317 | chr2:179636046;179636045;179636044 |
N2AB | 2670 | 8233;8234;8235 | chr2:178771319;178771318;178771317 | chr2:179636046;179636045;179636044 |
N2A | 2670 | 8233;8234;8235 | chr2:178771319;178771318;178771317 | chr2:179636046;179636045;179636044 |
N2B | 2624 | 8095;8096;8097 | chr2:178771319;178771318;178771317 | chr2:179636046;179636045;179636044 |
Novex-1 | 2624 | 8095;8096;8097 | chr2:178771319;178771318;178771317 | chr2:179636046;179636045;179636044 |
Novex-2 | 2624 | 8095;8096;8097 | chr2:178771319;178771318;178771317 | chr2:179636046;179636045;179636044 |
Novex-3 | 2670 | 8233;8234;8235 | chr2:178771319;178771318;178771317 | chr2:179636046;179636045;179636044 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1344075805 | None | 0.015 | N | 0.173 | 0.2 | 0.264547087235 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92976E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1376 | likely_benign | 0.1372 | benign | -0.441 | Destabilizing | 0.193 | N | 0.31 | neutral | D | 0.586286171 | None | None | N |
D/C | 0.526 | ambiguous | 0.4917 | ambiguous | -0.051 | Destabilizing | 0.981 | D | 0.458 | neutral | None | None | None | None | N |
D/E | 0.1498 | likely_benign | 0.1492 | benign | -0.389 | Destabilizing | 0.001 | N | 0.193 | neutral | N | 0.481147208 | None | None | N |
D/F | 0.4473 | ambiguous | 0.4206 | ambiguous | -0.349 | Destabilizing | 0.818 | D | 0.421 | neutral | None | None | None | None | N |
D/G | 0.1862 | likely_benign | 0.1845 | benign | -0.652 | Destabilizing | 0.324 | N | 0.292 | neutral | D | 0.577469115 | None | None | N |
D/H | 0.2182 | likely_benign | 0.1992 | benign | -0.294 | Destabilizing | 0.773 | D | 0.319 | neutral | D | 0.619528616 | None | None | N |
D/I | 0.2094 | likely_benign | 0.2053 | benign | 0.072 | Stabilizing | 0.019 | N | 0.309 | neutral | None | None | None | None | N |
D/K | 0.2401 | likely_benign | 0.2326 | benign | 0.188 | Stabilizing | 0.019 | N | 0.213 | neutral | None | None | None | None | N |
D/L | 0.2742 | likely_benign | 0.2598 | benign | 0.072 | Stabilizing | 0.241 | N | 0.369 | neutral | None | None | None | None | N |
D/M | 0.481 | ambiguous | 0.4664 | ambiguous | 0.286 | Stabilizing | 0.944 | D | 0.419 | neutral | None | None | None | None | N |
D/N | 0.0871 | likely_benign | 0.0847 | benign | -0.14 | Destabilizing | 0.015 | N | 0.173 | neutral | N | 0.501928201 | None | None | N |
D/P | 0.8603 | likely_pathogenic | 0.8359 | pathogenic | -0.077 | Destabilizing | 0.818 | D | 0.333 | neutral | None | None | None | None | N |
D/Q | 0.2633 | likely_benign | 0.2582 | benign | -0.11 | Destabilizing | 0.527 | D | 0.291 | neutral | None | None | None | None | N |
D/R | 0.2786 | likely_benign | 0.2617 | benign | 0.332 | Stabilizing | 0.527 | D | 0.395 | neutral | None | None | None | None | N |
D/S | 0.1075 | likely_benign | 0.107 | benign | -0.257 | Destabilizing | 0.241 | N | 0.233 | neutral | None | None | None | None | N |
D/T | 0.1784 | likely_benign | 0.1785 | benign | -0.091 | Destabilizing | 0.388 | N | 0.319 | neutral | None | None | None | None | N |
D/V | 0.1352 | likely_benign | 0.1296 | benign | -0.077 | Destabilizing | 0.001 | N | 0.269 | neutral | D | 0.534816911 | None | None | N |
D/W | 0.8085 | likely_pathogenic | 0.7855 | pathogenic | -0.187 | Destabilizing | 0.981 | D | 0.529 | neutral | None | None | None | None | N |
D/Y | 0.1874 | likely_benign | 0.1695 | benign | -0.111 | Destabilizing | 0.912 | D | 0.42 | neutral | D | 0.643145442 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.