Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26702 | 80329;80330;80331 | chr2:178566028;178566027;178566026 | chr2:179430755;179430754;179430753 |
N2AB | 25061 | 75406;75407;75408 | chr2:178566028;178566027;178566026 | chr2:179430755;179430754;179430753 |
N2A | 24134 | 72625;72626;72627 | chr2:178566028;178566027;178566026 | chr2:179430755;179430754;179430753 |
N2B | 17637 | 53134;53135;53136 | chr2:178566028;178566027;178566026 | chr2:179430755;179430754;179430753 |
Novex-1 | 17762 | 53509;53510;53511 | chr2:178566028;178566027;178566026 | chr2:179430755;179430754;179430753 |
Novex-2 | 17829 | 53710;53711;53712 | chr2:178566028;178566027;178566026 | chr2:179430755;179430754;179430753 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs746800300 | -1.445 | 0.999 | N | 0.569 | 0.344 | 0.566919426312 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
L/V | rs746800300 | -1.445 | 0.999 | N | 0.569 | 0.344 | 0.566919426312 | gnomAD-4.0.0 | 3.18377E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8898 | likely_pathogenic | 0.9084 | pathogenic | -2.457 | Highly Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/C | 0.8614 | likely_pathogenic | 0.8936 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -3.027 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/E | 0.9978 | likely_pathogenic | 0.9975 | pathogenic | -2.723 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/F | 0.6448 | likely_pathogenic | 0.6542 | pathogenic | -1.498 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/G | 0.9922 | likely_pathogenic | 0.9925 | pathogenic | -2.997 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/H | 0.9938 | likely_pathogenic | 0.9927 | pathogenic | -2.833 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/I | 0.1033 | likely_benign | 0.1063 | benign | -0.807 | Destabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | N |
L/K | 0.9968 | likely_pathogenic | 0.9961 | pathogenic | -1.846 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/M | 0.3413 | ambiguous | 0.3656 | ambiguous | -0.87 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | N | 0.512835939 | None | None | N |
L/N | 0.9983 | likely_pathogenic | 0.9982 | pathogenic | -2.643 | Highly Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
L/P | 0.9926 | likely_pathogenic | 0.9916 | pathogenic | -1.353 | Destabilizing | 1.0 | D | 0.92 | deleterious | D | 0.559186213 | None | None | N |
L/Q | 0.9913 | likely_pathogenic | 0.99 | pathogenic | -2.202 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | D | 0.559186213 | None | None | N |
L/R | 0.9907 | likely_pathogenic | 0.9885 | pathogenic | -2.157 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | D | 0.559186213 | None | None | N |
L/S | 0.9917 | likely_pathogenic | 0.9922 | pathogenic | -2.963 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/T | 0.9442 | likely_pathogenic | 0.9498 | pathogenic | -2.505 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
L/V | 0.1236 | likely_benign | 0.1392 | benign | -1.353 | Destabilizing | 0.999 | D | 0.569 | neutral | N | 0.510384967 | None | None | N |
L/W | 0.9773 | likely_pathogenic | 0.9737 | pathogenic | -1.736 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/Y | 0.9832 | likely_pathogenic | 0.9834 | pathogenic | -1.657 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.