Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2670580338;80339;80340 chr2:178566019;178566018;178566017chr2:179430746;179430745;179430744
N2AB2506475415;75416;75417 chr2:178566019;178566018;178566017chr2:179430746;179430745;179430744
N2A2413772634;72635;72636 chr2:178566019;178566018;178566017chr2:179430746;179430745;179430744
N2B1764053143;53144;53145 chr2:178566019;178566018;178566017chr2:179430746;179430745;179430744
Novex-11776553518;53519;53520 chr2:178566019;178566018;178566017chr2:179430746;179430745;179430744
Novex-21783253719;53720;53721 chr2:178566019;178566018;178566017chr2:179430746;179430745;179430744
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAG
  • RefSeq wild type template codon: CTC
  • Domain: Fn3-82
  • Domain position: 23
  • Structural Position: 25
  • Q(SASA): 0.4502
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/D rs558830502 -0.954 0.002 N 0.315 0.099 0.0666544352282 gnomAD-2.1.1 4.29102E-04 None None None None N None 0 0 None 0 6.00123E-03 None 3.27E-05 None 0 7.83E-06 1.40766E-04
E/D rs558830502 -0.954 0.002 N 0.315 0.099 0.0666544352282 gnomAD-3.1.2 1.77529E-04 None None None None N None 0 0 0 0 4.83559E-03 None 0 0 1.47E-05 2.06954E-04 0
E/D rs558830502 -0.954 0.002 N 0.315 0.099 0.0666544352282 1000 genomes 5.99042E-04 None None None None N None 0 0 None None 3E-03 0 None None None 0 None
E/D rs558830502 -0.954 0.002 N 0.315 0.099 0.0666544352282 gnomAD-4.0.0 1.3263E-04 None None None None N None 0 0 None 0 4.21517E-03 None 0 0 2.54322E-06 3.29439E-05 3.04185E-04
E/K rs758610676 -0.435 0.002 N 0.379 0.232 0.18995819373 gnomAD-2.1.1 4.03E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.91E-06 0
E/K rs758610676 -0.435 0.002 N 0.379 0.232 0.18995819373 gnomAD-4.0.0 2.7373E-06 None None None None N None 0 2.23674E-05 None 0 2.51991E-05 None 0 0 1.7992E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.2566 likely_benign 0.3111 benign -0.793 Destabilizing 0.201 N 0.625 neutral N 0.521599252 None None N
E/C 0.8668 likely_pathogenic 0.9055 pathogenic -0.374 Destabilizing 0.982 D 0.732 prob.delet. None None None None N
E/D 0.0819 likely_benign 0.102 benign -0.919 Destabilizing 0.002 N 0.315 neutral N 0.437769934 None None N
E/F 0.8339 likely_pathogenic 0.8765 pathogenic -0.55 Destabilizing 0.982 D 0.76 deleterious None None None None N
E/G 0.2757 likely_benign 0.3586 ambiguous -1.097 Destabilizing 0.334 N 0.682 prob.neutral N 0.48190585 None None N
E/H 0.6321 likely_pathogenic 0.6952 pathogenic -0.796 Destabilizing 0.947 D 0.617 neutral None None None None N
E/I 0.5415 ambiguous 0.5661 pathogenic 0.017 Stabilizing 0.826 D 0.775 deleterious None None None None N
E/K 0.376 ambiguous 0.4246 ambiguous -0.623 Destabilizing 0.002 N 0.379 neutral N 0.461241439 None None N
E/L 0.5054 ambiguous 0.5545 ambiguous 0.017 Stabilizing 0.7 D 0.745 deleterious None None None None N
E/M 0.5577 ambiguous 0.5951 pathogenic 0.416 Stabilizing 0.982 D 0.759 deleterious None None None None N
E/N 0.2206 likely_benign 0.2795 benign -0.871 Destabilizing 0.539 D 0.612 neutral None None None None N
E/P 0.9703 likely_pathogenic 0.9813 pathogenic -0.232 Destabilizing 0.826 D 0.759 deleterious None None None None N
E/Q 0.2172 likely_benign 0.2378 benign -0.786 Destabilizing 0.638 D 0.568 neutral N 0.505379006 None None N
E/R 0.5748 likely_pathogenic 0.6335 pathogenic -0.379 Destabilizing 0.539 D 0.611 neutral None None None None N
E/S 0.2319 likely_benign 0.2849 benign -1.15 Destabilizing 0.25 N 0.519 neutral None None None None N
E/T 0.324 likely_benign 0.3593 ambiguous -0.916 Destabilizing 0.7 D 0.726 prob.delet. None None None None N
E/V 0.3649 ambiguous 0.3801 ambiguous -0.232 Destabilizing 0.638 D 0.744 deleterious N 0.481652361 None None N
E/W 0.9437 likely_pathogenic 0.9637 pathogenic -0.398 Destabilizing 0.982 D 0.723 prob.delet. None None None None N
E/Y 0.6782 likely_pathogenic 0.7635 pathogenic -0.347 Destabilizing 0.935 D 0.776 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.