Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26705 | 80338;80339;80340 | chr2:178566019;178566018;178566017 | chr2:179430746;179430745;179430744 |
N2AB | 25064 | 75415;75416;75417 | chr2:178566019;178566018;178566017 | chr2:179430746;179430745;179430744 |
N2A | 24137 | 72634;72635;72636 | chr2:178566019;178566018;178566017 | chr2:179430746;179430745;179430744 |
N2B | 17640 | 53143;53144;53145 | chr2:178566019;178566018;178566017 | chr2:179430746;179430745;179430744 |
Novex-1 | 17765 | 53518;53519;53520 | chr2:178566019;178566018;178566017 | chr2:179430746;179430745;179430744 |
Novex-2 | 17832 | 53719;53720;53721 | chr2:178566019;178566018;178566017 | chr2:179430746;179430745;179430744 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs558830502 | -0.954 | 0.002 | N | 0.315 | 0.099 | 0.0666544352282 | gnomAD-2.1.1 | 4.29102E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.00123E-03 | None | 3.27E-05 | None | 0 | 7.83E-06 | 1.40766E-04 |
E/D | rs558830502 | -0.954 | 0.002 | N | 0.315 | 0.099 | 0.0666544352282 | gnomAD-3.1.2 | 1.77529E-04 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 4.83559E-03 | None | 0 | 0 | 1.47E-05 | 2.06954E-04 | 0 |
E/D | rs558830502 | -0.954 | 0.002 | N | 0.315 | 0.099 | 0.0666544352282 | 1000 genomes | 5.99042E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 3E-03 | 0 | None | None | None | 0 | None |
E/D | rs558830502 | -0.954 | 0.002 | N | 0.315 | 0.099 | 0.0666544352282 | gnomAD-4.0.0 | 1.3263E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.21517E-03 | None | 0 | 0 | 2.54322E-06 | 3.29439E-05 | 3.04185E-04 |
E/K | rs758610676 | -0.435 | 0.002 | N | 0.379 | 0.232 | 0.18995819373 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/K | rs758610676 | -0.435 | 0.002 | N | 0.379 | 0.232 | 0.18995819373 | gnomAD-4.0.0 | 2.7373E-06 | None | None | None | None | N | None | 0 | 2.23674E-05 | None | 0 | 2.51991E-05 | None | 0 | 0 | 1.7992E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2566 | likely_benign | 0.3111 | benign | -0.793 | Destabilizing | 0.201 | N | 0.625 | neutral | N | 0.521599252 | None | None | N |
E/C | 0.8668 | likely_pathogenic | 0.9055 | pathogenic | -0.374 | Destabilizing | 0.982 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/D | 0.0819 | likely_benign | 0.102 | benign | -0.919 | Destabilizing | 0.002 | N | 0.315 | neutral | N | 0.437769934 | None | None | N |
E/F | 0.8339 | likely_pathogenic | 0.8765 | pathogenic | -0.55 | Destabilizing | 0.982 | D | 0.76 | deleterious | None | None | None | None | N |
E/G | 0.2757 | likely_benign | 0.3586 | ambiguous | -1.097 | Destabilizing | 0.334 | N | 0.682 | prob.neutral | N | 0.48190585 | None | None | N |
E/H | 0.6321 | likely_pathogenic | 0.6952 | pathogenic | -0.796 | Destabilizing | 0.947 | D | 0.617 | neutral | None | None | None | None | N |
E/I | 0.5415 | ambiguous | 0.5661 | pathogenic | 0.017 | Stabilizing | 0.826 | D | 0.775 | deleterious | None | None | None | None | N |
E/K | 0.376 | ambiguous | 0.4246 | ambiguous | -0.623 | Destabilizing | 0.002 | N | 0.379 | neutral | N | 0.461241439 | None | None | N |
E/L | 0.5054 | ambiguous | 0.5545 | ambiguous | 0.017 | Stabilizing | 0.7 | D | 0.745 | deleterious | None | None | None | None | N |
E/M | 0.5577 | ambiguous | 0.5951 | pathogenic | 0.416 | Stabilizing | 0.982 | D | 0.759 | deleterious | None | None | None | None | N |
E/N | 0.2206 | likely_benign | 0.2795 | benign | -0.871 | Destabilizing | 0.539 | D | 0.612 | neutral | None | None | None | None | N |
E/P | 0.9703 | likely_pathogenic | 0.9813 | pathogenic | -0.232 | Destabilizing | 0.826 | D | 0.759 | deleterious | None | None | None | None | N |
E/Q | 0.2172 | likely_benign | 0.2378 | benign | -0.786 | Destabilizing | 0.638 | D | 0.568 | neutral | N | 0.505379006 | None | None | N |
E/R | 0.5748 | likely_pathogenic | 0.6335 | pathogenic | -0.379 | Destabilizing | 0.539 | D | 0.611 | neutral | None | None | None | None | N |
E/S | 0.2319 | likely_benign | 0.2849 | benign | -1.15 | Destabilizing | 0.25 | N | 0.519 | neutral | None | None | None | None | N |
E/T | 0.324 | likely_benign | 0.3593 | ambiguous | -0.916 | Destabilizing | 0.7 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/V | 0.3649 | ambiguous | 0.3801 | ambiguous | -0.232 | Destabilizing | 0.638 | D | 0.744 | deleterious | N | 0.481652361 | None | None | N |
E/W | 0.9437 | likely_pathogenic | 0.9637 | pathogenic | -0.398 | Destabilizing | 0.982 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/Y | 0.6782 | likely_pathogenic | 0.7635 | pathogenic | -0.347 | Destabilizing | 0.935 | D | 0.776 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.