Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26710 | 80353;80354;80355 | chr2:178566004;178566003;178566002 | chr2:179430731;179430730;179430729 |
N2AB | 25069 | 75430;75431;75432 | chr2:178566004;178566003;178566002 | chr2:179430731;179430730;179430729 |
N2A | 24142 | 72649;72650;72651 | chr2:178566004;178566003;178566002 | chr2:179430731;179430730;179430729 |
N2B | 17645 | 53158;53159;53160 | chr2:178566004;178566003;178566002 | chr2:179430731;179430730;179430729 |
Novex-1 | 17770 | 53533;53534;53535 | chr2:178566004;178566003;178566002 | chr2:179430731;179430730;179430729 |
Novex-2 | 17837 | 53734;53735;53736 | chr2:178566004;178566003;178566002 | chr2:179430731;179430730;179430729 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 1.0 | D | 0.717 | 0.685 | 0.418964662724 | gnomAD-4.0.0 | 1.5918E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85938E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.9293 | likely_pathogenic | 0.8834 | pathogenic | -0.437 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.506553791 | None | None | I |
D/C | 0.9848 | likely_pathogenic | 0.9793 | pathogenic | 0.006 | Stabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | I |
D/E | 0.8266 | likely_pathogenic | 0.7832 | pathogenic | -0.641 | Destabilizing | 0.994 | D | 0.448 | neutral | N | 0.492537686 | None | None | I |
D/F | 0.9898 | likely_pathogenic | 0.9845 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
D/G | 0.9247 | likely_pathogenic | 0.871 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | D | 0.523216469 | None | None | I |
D/H | 0.9553 | likely_pathogenic | 0.9307 | pathogenic | -0.715 | Destabilizing | 1.0 | D | 0.646 | neutral | N | 0.518670565 | None | None | I |
D/I | 0.9811 | likely_pathogenic | 0.97 | pathogenic | 0.251 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
D/K | 0.9879 | likely_pathogenic | 0.9807 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
D/L | 0.9737 | likely_pathogenic | 0.9573 | pathogenic | 0.251 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
D/M | 0.9929 | likely_pathogenic | 0.9868 | pathogenic | 0.653 | Stabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | I |
D/N | 0.4432 | ambiguous | 0.3625 | ambiguous | -0.361 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.470927939 | None | None | I |
D/P | 0.9899 | likely_pathogenic | 0.9853 | pathogenic | 0.046 | Stabilizing | 0.998 | D | 0.738 | prob.delet. | None | None | None | None | I |
D/Q | 0.9759 | likely_pathogenic | 0.9591 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
D/R | 0.9828 | likely_pathogenic | 0.9722 | pathogenic | -0.018 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
D/S | 0.7256 | likely_pathogenic | 0.5972 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
D/T | 0.9059 | likely_pathogenic | 0.8037 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
D/V | 0.9549 | likely_pathogenic | 0.9271 | pathogenic | 0.046 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.521949021 | None | None | I |
D/W | 0.9974 | likely_pathogenic | 0.9963 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | I |
D/Y | 0.9294 | likely_pathogenic | 0.9076 | pathogenic | -0.21 | Destabilizing | 1.0 | D | 0.627 | neutral | D | 0.545929079 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.