Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26715 | 80368;80369;80370 | chr2:178565989;178565988;178565987 | chr2:179430716;179430715;179430714 |
N2AB | 25074 | 75445;75446;75447 | chr2:178565989;178565988;178565987 | chr2:179430716;179430715;179430714 |
N2A | 24147 | 72664;72665;72666 | chr2:178565989;178565988;178565987 | chr2:179430716;179430715;179430714 |
N2B | 17650 | 53173;53174;53175 | chr2:178565989;178565988;178565987 | chr2:179430716;179430715;179430714 |
Novex-1 | 17775 | 53548;53549;53550 | chr2:178565989;178565988;178565987 | chr2:179430716;179430715;179430714 |
Novex-2 | 17842 | 53749;53750;53751 | chr2:178565989;178565988;178565987 | chr2:179430716;179430715;179430714 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs1705694653 | None | 0.317 | N | 0.733 | 0.289 | 0.511503663882 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93349E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/F | rs1705694653 | None | 0.317 | N | 0.733 | 0.289 | 0.511503663882 | gnomAD-4.0.0 | 2.56306E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.42624E-05 | None | 0 | 0 | 0 | 0 | 2.84576E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9033 | likely_pathogenic | 0.9078 | pathogenic | -2.049 | Highly Destabilizing | 0.052 | N | 0.569 | neutral | N | 0.491767672 | None | None | I |
V/C | 0.943 | likely_pathogenic | 0.9525 | pathogenic | -1.226 | Destabilizing | 0.935 | D | 0.695 | prob.neutral | None | None | None | None | I |
V/D | 0.9933 | likely_pathogenic | 0.9926 | pathogenic | -2.463 | Highly Destabilizing | 0.484 | N | 0.785 | deleterious | N | 0.477017552 | None | None | I |
V/E | 0.9761 | likely_pathogenic | 0.9769 | pathogenic | -2.386 | Highly Destabilizing | 0.555 | D | 0.753 | deleterious | None | None | None | None | I |
V/F | 0.8406 | likely_pathogenic | 0.8354 | pathogenic | -1.475 | Destabilizing | 0.317 | N | 0.733 | prob.delet. | N | 0.507844011 | None | None | I |
V/G | 0.9167 | likely_pathogenic | 0.9145 | pathogenic | -2.452 | Highly Destabilizing | 0.484 | N | 0.788 | deleterious | N | 0.510885885 | None | None | I |
V/H | 0.9934 | likely_pathogenic | 0.9934 | pathogenic | -2.152 | Highly Destabilizing | 0.935 | D | 0.765 | deleterious | None | None | None | None | I |
V/I | 0.0678 | likely_benign | 0.0652 | benign | -0.976 | Destabilizing | None | N | 0.15 | neutral | N | 0.3585915 | None | None | I |
V/K | 0.9848 | likely_pathogenic | 0.9848 | pathogenic | -1.773 | Destabilizing | 0.555 | D | 0.751 | deleterious | None | None | None | None | I |
V/L | 0.4542 | ambiguous | 0.4393 | ambiguous | -0.976 | Destabilizing | 0.004 | N | 0.319 | neutral | N | 0.50280006 | None | None | I |
V/M | 0.5736 | likely_pathogenic | 0.5759 | pathogenic | -0.61 | Destabilizing | 0.38 | N | 0.665 | neutral | None | None | None | None | I |
V/N | 0.9621 | likely_pathogenic | 0.9561 | pathogenic | -1.671 | Destabilizing | 0.791 | D | 0.8 | deleterious | None | None | None | None | I |
V/P | 0.8793 | likely_pathogenic | 0.8854 | pathogenic | -1.305 | Destabilizing | 0.791 | D | 0.763 | deleterious | None | None | None | None | I |
V/Q | 0.977 | likely_pathogenic | 0.9777 | pathogenic | -1.754 | Destabilizing | 0.791 | D | 0.764 | deleterious | None | None | None | None | I |
V/R | 0.9788 | likely_pathogenic | 0.9784 | pathogenic | -1.285 | Destabilizing | 0.555 | D | 0.795 | deleterious | None | None | None | None | I |
V/S | 0.9538 | likely_pathogenic | 0.9487 | pathogenic | -2.166 | Highly Destabilizing | 0.555 | D | 0.763 | deleterious | None | None | None | None | I |
V/T | 0.8949 | likely_pathogenic | 0.8951 | pathogenic | -1.984 | Destabilizing | 0.149 | N | 0.603 | neutral | None | None | None | None | I |
V/W | 0.9926 | likely_pathogenic | 0.993 | pathogenic | -1.867 | Destabilizing | 0.935 | D | 0.773 | deleterious | None | None | None | None | I |
V/Y | 0.9737 | likely_pathogenic | 0.9747 | pathogenic | -1.582 | Destabilizing | 0.555 | D | 0.721 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.