Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26719 | 80380;80381;80382 | chr2:178565977;178565976;178565975 | chr2:179430704;179430703;179430702 |
N2AB | 25078 | 75457;75458;75459 | chr2:178565977;178565976;178565975 | chr2:179430704;179430703;179430702 |
N2A | 24151 | 72676;72677;72678 | chr2:178565977;178565976;178565975 | chr2:179430704;179430703;179430702 |
N2B | 17654 | 53185;53186;53187 | chr2:178565977;178565976;178565975 | chr2:179430704;179430703;179430702 |
Novex-1 | 17779 | 53560;53561;53562 | chr2:178565977;178565976;178565975 | chr2:179430704;179430703;179430702 |
Novex-2 | 17846 | 53761;53762;53763 | chr2:178565977;178565976;178565975 | chr2:179430704;179430703;179430702 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.517 | N | 0.541 | 0.335 | 0.501060295512 | gnomAD-4.0.0 | 5.47426E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29688E-06 | 0 | 1.65684E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4703 | ambiguous | 0.5363 | ambiguous | -2.068 | Highly Destabilizing | 0.517 | D | 0.541 | neutral | N | 0.476520118 | None | None | N |
V/C | 0.6669 | likely_pathogenic | 0.7327 | pathogenic | -1.974 | Destabilizing | 0.996 | D | 0.655 | neutral | None | None | None | None | N |
V/D | 0.8145 | likely_pathogenic | 0.8752 | pathogenic | -3.052 | Highly Destabilizing | 0.987 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/E | 0.6379 | likely_pathogenic | 0.7622 | pathogenic | -2.957 | Highly Destabilizing | 0.983 | D | 0.663 | neutral | N | 0.511280684 | None | None | N |
V/F | 0.2347 | likely_benign | 0.2783 | benign | -1.492 | Destabilizing | 0.923 | D | 0.638 | neutral | None | None | None | None | N |
V/G | 0.6008 | likely_pathogenic | 0.6595 | pathogenic | -2.471 | Highly Destabilizing | 0.949 | D | 0.687 | prob.neutral | N | 0.486181357 | None | None | N |
V/H | 0.6387 | likely_pathogenic | 0.7291 | pathogenic | -1.973 | Destabilizing | 0.996 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/I | 0.0667 | likely_benign | 0.07 | benign | -0.99 | Destabilizing | 0.005 | N | 0.247 | neutral | None | None | None | None | N |
V/K | 0.5992 | likely_pathogenic | 0.7275 | pathogenic | -1.801 | Destabilizing | 0.961 | D | 0.652 | neutral | None | None | None | None | N |
V/L | 0.2001 | likely_benign | 0.2321 | benign | -0.99 | Destabilizing | 0.003 | N | 0.287 | neutral | N | 0.463780312 | None | None | N |
V/M | 0.1689 | likely_benign | 0.2155 | benign | -1.003 | Destabilizing | 0.901 | D | 0.629 | neutral | N | 0.474913957 | None | None | N |
V/N | 0.531 | ambiguous | 0.6157 | pathogenic | -1.992 | Destabilizing | 0.987 | D | 0.72 | prob.delet. | None | None | None | None | N |
V/P | 0.9923 | likely_pathogenic | 0.9922 | pathogenic | -1.321 | Destabilizing | 0.987 | D | 0.669 | neutral | None | None | None | None | N |
V/Q | 0.4968 | ambiguous | 0.6261 | pathogenic | -2.081 | Highly Destabilizing | 0.987 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/R | 0.4874 | ambiguous | 0.616 | pathogenic | -1.307 | Destabilizing | 0.987 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/S | 0.4832 | ambiguous | 0.5532 | ambiguous | -2.498 | Highly Destabilizing | 0.961 | D | 0.644 | neutral | None | None | None | None | N |
V/T | 0.3657 | ambiguous | 0.4224 | ambiguous | -2.289 | Highly Destabilizing | 0.775 | D | 0.583 | neutral | None | None | None | None | N |
V/W | 0.8419 | likely_pathogenic | 0.884 | pathogenic | -1.861 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/Y | 0.6132 | likely_pathogenic | 0.6778 | pathogenic | -1.558 | Destabilizing | 0.961 | D | 0.659 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.