Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26722 | 80389;80390;80391 | chr2:178565968;178565967;178565966 | chr2:179430695;179430694;179430693 |
N2AB | 25081 | 75466;75467;75468 | chr2:178565968;178565967;178565966 | chr2:179430695;179430694;179430693 |
N2A | 24154 | 72685;72686;72687 | chr2:178565968;178565967;178565966 | chr2:179430695;179430694;179430693 |
N2B | 17657 | 53194;53195;53196 | chr2:178565968;178565967;178565966 | chr2:179430695;179430694;179430693 |
Novex-1 | 17782 | 53569;53570;53571 | chr2:178565968;178565967;178565966 | chr2:179430695;179430694;179430693 |
Novex-2 | 17849 | 53770;53771;53772 | chr2:178565968;178565967;178565966 | chr2:179430695;179430694;179430693 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.987 | N | 0.819 | 0.451 | 0.322230723748 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9679 | likely_pathogenic | 0.9727 | pathogenic | -1.426 | Destabilizing | 0.996 | D | 0.712 | prob.delet. | None | None | None | None | N |
K/C | 0.8931 | likely_pathogenic | 0.9077 | pathogenic | -1.459 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
K/D | 0.9985 | likely_pathogenic | 0.9988 | pathogenic | -2.121 | Highly Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
K/E | 0.9474 | likely_pathogenic | 0.957 | pathogenic | -1.79 | Destabilizing | 0.982 | D | 0.725 | prob.delet. | D | 0.522238509 | None | None | N |
K/F | 0.979 | likely_pathogenic | 0.9798 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
K/G | 0.9857 | likely_pathogenic | 0.9871 | pathogenic | -1.937 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
K/H | 0.8391 | likely_pathogenic | 0.8582 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
K/I | 0.8517 | likely_pathogenic | 0.8805 | pathogenic | 0.04 | Stabilizing | 0.975 | D | 0.853 | deleterious | N | 0.470177016 | None | None | N |
K/L | 0.8571 | likely_pathogenic | 0.8699 | pathogenic | 0.04 | Stabilizing | 0.962 | D | 0.791 | deleterious | None | None | None | None | N |
K/M | 0.727 | likely_pathogenic | 0.7522 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
K/N | 0.9916 | likely_pathogenic | 0.9931 | pathogenic | -1.935 | Destabilizing | 0.998 | D | 0.819 | deleterious | D | 0.522238509 | None | None | N |
K/P | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
K/Q | 0.6254 | likely_pathogenic | 0.6646 | pathogenic | -1.512 | Destabilizing | 0.987 | D | 0.819 | deleterious | N | 0.497550889 | None | None | N |
K/R | 0.1196 | likely_benign | 0.1206 | benign | -0.931 | Destabilizing | 0.198 | N | 0.39 | neutral | N | 0.495180655 | None | None | N |
K/S | 0.9817 | likely_pathogenic | 0.9843 | pathogenic | -2.447 | Highly Destabilizing | 0.996 | D | 0.753 | deleterious | None | None | None | None | N |
K/T | 0.8896 | likely_pathogenic | 0.9145 | pathogenic | -1.845 | Destabilizing | 0.995 | D | 0.79 | deleterious | N | 0.502866807 | None | None | N |
K/V | 0.815 | likely_pathogenic | 0.8457 | pathogenic | -0.43 | Destabilizing | 0.985 | D | 0.825 | deleterious | None | None | None | None | N |
K/W | 0.9674 | likely_pathogenic | 0.9727 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
K/Y | 0.9346 | likely_pathogenic | 0.9384 | pathogenic | -0.335 | Destabilizing | 0.996 | D | 0.853 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.