Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26728 | 80407;80408;80409 | chr2:178565950;178565949;178565948 | chr2:179430677;179430676;179430675 |
N2AB | 25087 | 75484;75485;75486 | chr2:178565950;178565949;178565948 | chr2:179430677;179430676;179430675 |
N2A | 24160 | 72703;72704;72705 | chr2:178565950;178565949;178565948 | chr2:179430677;179430676;179430675 |
N2B | 17663 | 53212;53213;53214 | chr2:178565950;178565949;178565948 | chr2:179430677;179430676;179430675 |
Novex-1 | 17788 | 53587;53588;53589 | chr2:178565950;178565949;178565948 | chr2:179430677;179430676;179430675 |
Novex-2 | 17855 | 53788;53789;53790 | chr2:178565950;178565949;178565948 | chr2:179430677;179430676;179430675 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.978 | N | 0.578 | 0.26 | 0.30212335484 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9425 | likely_pathogenic | 0.9531 | pathogenic | -0.088 | Destabilizing | 0.997 | D | 0.584 | neutral | None | None | None | None | N |
K/C | 0.9785 | likely_pathogenic | 0.981 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/D | 0.9891 | likely_pathogenic | 0.9919 | pathogenic | -0.451 | Destabilizing | 0.999 | D | 0.588 | neutral | None | None | None | None | N |
K/E | 0.9427 | likely_pathogenic | 0.9613 | pathogenic | -0.474 | Destabilizing | 0.978 | D | 0.578 | neutral | N | 0.508915169 | None | None | N |
K/F | 0.9863 | likely_pathogenic | 0.9862 | pathogenic | -0.478 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/G | 0.9562 | likely_pathogenic | 0.9635 | pathogenic | -0.179 | Destabilizing | 1.0 | D | 0.546 | neutral | None | None | None | None | N |
K/H | 0.8556 | likely_pathogenic | 0.8734 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
K/I | 0.9217 | likely_pathogenic | 0.939 | pathogenic | 0.07 | Stabilizing | 0.995 | D | 0.679 | prob.neutral | N | 0.484219574 | None | None | N |
K/L | 0.8392 | likely_pathogenic | 0.874 | pathogenic | 0.07 | Stabilizing | 0.976 | D | 0.546 | neutral | None | None | None | None | N |
K/M | 0.7558 | likely_pathogenic | 0.8077 | pathogenic | -0.262 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
K/N | 0.9734 | likely_pathogenic | 0.9805 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.619 | neutral | N | 0.511302113 | None | None | N |
K/P | 0.9653 | likely_pathogenic | 0.9676 | pathogenic | 0.037 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
K/Q | 0.6782 | likely_pathogenic | 0.7479 | pathogenic | -0.312 | Destabilizing | 0.766 | D | 0.487 | neutral | N | 0.465061681 | None | None | N |
K/R | 0.1425 | likely_benign | 0.1351 | benign | -0.243 | Destabilizing | 0.982 | D | 0.555 | neutral | N | 0.487350605 | None | None | N |
K/S | 0.9756 | likely_pathogenic | 0.9802 | pathogenic | -0.507 | Destabilizing | 0.997 | D | 0.588 | neutral | None | None | None | None | N |
K/T | 0.8904 | likely_pathogenic | 0.9205 | pathogenic | -0.432 | Destabilizing | 0.998 | D | 0.597 | neutral | N | 0.46664507 | None | None | N |
K/V | 0.8999 | likely_pathogenic | 0.9209 | pathogenic | 0.037 | Stabilizing | 0.991 | D | 0.616 | neutral | None | None | None | None | N |
K/W | 0.9773 | likely_pathogenic | 0.9769 | pathogenic | -0.593 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/Y | 0.9613 | likely_pathogenic | 0.9632 | pathogenic | -0.259 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.