Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26730 | 80413;80414;80415 | chr2:178565944;178565943;178565942 | chr2:179430671;179430670;179430669 |
N2AB | 25089 | 75490;75491;75492 | chr2:178565944;178565943;178565942 | chr2:179430671;179430670;179430669 |
N2A | 24162 | 72709;72710;72711 | chr2:178565944;178565943;178565942 | chr2:179430671;179430670;179430669 |
N2B | 17665 | 53218;53219;53220 | chr2:178565944;178565943;178565942 | chr2:179430671;179430670;179430669 |
Novex-1 | 17790 | 53593;53594;53595 | chr2:178565944;178565943;178565942 | chr2:179430671;179430670;179430669 |
Novex-2 | 17857 | 53794;53795;53796 | chr2:178565944;178565943;178565942 | chr2:179430671;179430670;179430669 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | None | None | 0.073 | N | 0.257 | 0.161 | 0.241078983079 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85902E-06 | 0 | 0 |
Y/H | rs768686591 | -1.152 | 0.999 | N | 0.614 | 0.528 | 0.4018988957 | gnomAD-4.0.0 | 1.59161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9868 | likely_pathogenic | 0.9802 | pathogenic | -2.618 | Highly Destabilizing | 0.998 | D | 0.543 | neutral | None | None | None | None | N |
Y/C | 0.8702 | likely_pathogenic | 0.8272 | pathogenic | -1.018 | Destabilizing | 1.0 | D | 0.613 | neutral | N | 0.463919137 | None | None | N |
Y/D | 0.9884 | likely_pathogenic | 0.9826 | pathogenic | -1.347 | Destabilizing | 1.0 | D | 0.647 | neutral | N | 0.47779343 | None | None | N |
Y/E | 0.9984 | likely_pathogenic | 0.9975 | pathogenic | -1.277 | Destabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | N |
Y/F | 0.0896 | likely_benign | 0.0925 | benign | -1.287 | Destabilizing | 0.073 | N | 0.257 | neutral | N | 0.460833221 | None | None | N |
Y/G | 0.9857 | likely_pathogenic | 0.9789 | pathogenic | -2.913 | Highly Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
Y/H | 0.8755 | likely_pathogenic | 0.8342 | pathogenic | -1.145 | Destabilizing | 0.999 | D | 0.614 | neutral | N | 0.472059439 | None | None | N |
Y/I | 0.9749 | likely_pathogenic | 0.9661 | pathogenic | -1.716 | Destabilizing | 0.95 | D | 0.581 | neutral | None | None | None | None | N |
Y/K | 0.998 | likely_pathogenic | 0.9968 | pathogenic | -1.17 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
Y/L | 0.9508 | likely_pathogenic | 0.9373 | pathogenic | -1.716 | Destabilizing | 0.845 | D | 0.52 | neutral | None | None | None | None | N |
Y/M | 0.976 | likely_pathogenic | 0.9688 | pathogenic | -1.272 | Destabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | N |
Y/N | 0.9573 | likely_pathogenic | 0.9392 | pathogenic | -1.406 | Destabilizing | 1.0 | D | 0.6 | neutral | N | 0.489403225 | None | None | N |
Y/P | 0.9917 | likely_pathogenic | 0.9874 | pathogenic | -2.014 | Highly Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
Y/Q | 0.9963 | likely_pathogenic | 0.9941 | pathogenic | -1.463 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
Y/R | 0.9928 | likely_pathogenic | 0.9893 | pathogenic | -0.541 | Destabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
Y/S | 0.9569 | likely_pathogenic | 0.9386 | pathogenic | -1.955 | Destabilizing | 0.999 | D | 0.618 | neutral | N | 0.488642757 | None | None | N |
Y/T | 0.9906 | likely_pathogenic | 0.9861 | pathogenic | -1.799 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
Y/V | 0.9588 | likely_pathogenic | 0.9448 | pathogenic | -2.014 | Highly Destabilizing | 0.996 | D | 0.561 | neutral | None | None | None | None | N |
Y/W | 0.2724 | likely_benign | 0.2655 | benign | -0.779 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.