Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26735 | 80428;80429;80430 | chr2:178565929;178565928;178565927 | chr2:179430656;179430655;179430654 |
N2AB | 25094 | 75505;75506;75507 | chr2:178565929;178565928;178565927 | chr2:179430656;179430655;179430654 |
N2A | 24167 | 72724;72725;72726 | chr2:178565929;178565928;178565927 | chr2:179430656;179430655;179430654 |
N2B | 17670 | 53233;53234;53235 | chr2:178565929;178565928;178565927 | chr2:179430656;179430655;179430654 |
Novex-1 | 17795 | 53608;53609;53610 | chr2:178565929;178565928;178565927 | chr2:179430656;179430655;179430654 |
Novex-2 | 17862 | 53809;53810;53811 | chr2:178565929;178565928;178565927 | chr2:179430656;179430655;179430654 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.012 | N | 0.208 | 0.106 | 0.104622674875 | gnomAD-4.0.0 | 6.84271E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99549E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0663 | likely_benign | 0.0661 | benign | -0.512 | Destabilizing | None | N | 0.091 | neutral | None | None | None | None | N |
S/C | 0.0989 | likely_benign | 0.1073 | benign | -0.309 | Destabilizing | 0.295 | N | 0.326 | neutral | N | 0.474841959 | None | None | N |
S/D | 0.3183 | likely_benign | 0.3944 | ambiguous | -0.297 | Destabilizing | 0.016 | N | 0.179 | neutral | None | None | None | None | N |
S/E | 0.413 | ambiguous | 0.4903 | ambiguous | -0.372 | Destabilizing | 0.016 | N | 0.179 | neutral | None | None | None | None | N |
S/F | 0.208 | likely_benign | 0.2442 | benign | -1.015 | Destabilizing | 0.356 | N | 0.321 | neutral | None | None | None | None | N |
S/G | 0.0698 | likely_benign | 0.0737 | benign | -0.663 | Destabilizing | 0.012 | N | 0.208 | neutral | N | 0.485390522 | None | None | N |
S/H | 0.2733 | likely_benign | 0.3043 | benign | -1.246 | Destabilizing | 0.214 | N | 0.335 | neutral | None | None | None | None | N |
S/I | 0.1268 | likely_benign | 0.1504 | benign | -0.236 | Destabilizing | 0.055 | N | 0.319 | neutral | N | 0.491180344 | None | None | N |
S/K | 0.5423 | ambiguous | 0.6152 | pathogenic | -0.626 | Destabilizing | 0.016 | N | 0.183 | neutral | None | None | None | None | N |
S/L | 0.0905 | likely_benign | 0.1014 | benign | -0.236 | Destabilizing | 0.016 | N | 0.259 | neutral | None | None | None | None | N |
S/M | 0.1554 | likely_benign | 0.1737 | benign | 0.22 | Stabilizing | 0.356 | N | 0.335 | neutral | None | None | None | None | N |
S/N | 0.087 | likely_benign | 0.0995 | benign | -0.409 | Destabilizing | None | N | 0.087 | neutral | N | 0.437191144 | None | None | N |
S/P | 0.1283 | likely_benign | 0.1295 | benign | -0.298 | Destabilizing | 0.136 | N | 0.327 | neutral | None | None | None | None | N |
S/Q | 0.3465 | ambiguous | 0.3929 | ambiguous | -0.723 | Destabilizing | 0.072 | N | 0.255 | neutral | None | None | None | None | N |
S/R | 0.519 | ambiguous | 0.5755 | pathogenic | -0.381 | Destabilizing | 0.055 | N | 0.284 | neutral | N | 0.476730967 | None | None | N |
S/T | 0.0711 | likely_benign | 0.0759 | benign | -0.479 | Destabilizing | None | N | 0.087 | neutral | N | 0.381721863 | None | None | N |
S/V | 0.1146 | likely_benign | 0.1325 | benign | -0.298 | Destabilizing | 0.016 | N | 0.26 | neutral | None | None | None | None | N |
S/W | 0.3762 | ambiguous | 0.4049 | ambiguous | -0.983 | Destabilizing | 0.864 | D | 0.346 | neutral | None | None | None | None | N |
S/Y | 0.1985 | likely_benign | 0.2246 | benign | -0.719 | Destabilizing | 0.628 | D | 0.32 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.