Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26744 | 80455;80456;80457 | chr2:178565902;178565901;178565900 | chr2:179430629;179430628;179430627 |
N2AB | 25103 | 75532;75533;75534 | chr2:178565902;178565901;178565900 | chr2:179430629;179430628;179430627 |
N2A | 24176 | 72751;72752;72753 | chr2:178565902;178565901;178565900 | chr2:179430629;179430628;179430627 |
N2B | 17679 | 53260;53261;53262 | chr2:178565902;178565901;178565900 | chr2:179430629;179430628;179430627 |
Novex-1 | 17804 | 53635;53636;53637 | chr2:178565902;178565901;178565900 | chr2:179430629;179430628;179430627 |
Novex-2 | 17871 | 53836;53837;53838 | chr2:178565902;178565901;178565900 | chr2:179430629;179430628;179430627 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.097 | N | 0.355 | 0.429 | 0.524584940466 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4312 | ambiguous | 0.461 | ambiguous | -1.755 | Destabilizing | 0.097 | N | 0.355 | neutral | N | 0.493470101 | None | None | N |
V/C | 0.9179 | likely_pathogenic | 0.9246 | pathogenic | -1.255 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
V/D | 0.9916 | likely_pathogenic | 0.9922 | pathogenic | -2.444 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/E | 0.9726 | likely_pathogenic | 0.9736 | pathogenic | -2.165 | Highly Destabilizing | 0.999 | D | 0.821 | deleterious | D | 0.545909988 | None | None | N |
V/F | 0.7063 | likely_pathogenic | 0.6981 | pathogenic | -1.025 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
V/G | 0.8367 | likely_pathogenic | 0.8481 | pathogenic | -2.335 | Highly Destabilizing | 0.995 | D | 0.81 | deleterious | D | 0.545909988 | None | None | N |
V/H | 0.9926 | likely_pathogenic | 0.9925 | pathogenic | -2.213 | Highly Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
V/I | 0.0914 | likely_benign | 0.0937 | benign | -0.112 | Destabilizing | 0.015 | N | 0.267 | neutral | None | None | None | None | N |
V/K | 0.9883 | likely_pathogenic | 0.9874 | pathogenic | -1.441 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
V/L | 0.4703 | ambiguous | 0.4696 | ambiguous | -0.112 | Destabilizing | 0.738 | D | 0.615 | neutral | N | 0.519460237 | None | None | N |
V/M | 0.4515 | ambiguous | 0.4644 | ambiguous | -0.228 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | D | 0.522525814 | None | None | N |
V/N | 0.975 | likely_pathogenic | 0.9776 | pathogenic | -1.941 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
V/P | 0.9633 | likely_pathogenic | 0.9711 | pathogenic | -0.635 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
V/Q | 0.9736 | likely_pathogenic | 0.9765 | pathogenic | -1.658 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/R | 0.9801 | likely_pathogenic | 0.9796 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/S | 0.8709 | likely_pathogenic | 0.8895 | pathogenic | -2.537 | Highly Destabilizing | 0.988 | D | 0.803 | deleterious | None | None | None | None | N |
V/T | 0.6175 | likely_pathogenic | 0.6448 | pathogenic | -2.091 | Highly Destabilizing | 0.948 | D | 0.671 | neutral | None | None | None | None | N |
V/W | 0.9903 | likely_pathogenic | 0.9892 | pathogenic | -1.579 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/Y | 0.9652 | likely_pathogenic | 0.9645 | pathogenic | -1.113 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.