Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26746 | 80461;80462;80463 | chr2:178565896;178565895;178565894 | chr2:179430623;179430622;179430621 |
N2AB | 25105 | 75538;75539;75540 | chr2:178565896;178565895;178565894 | chr2:179430623;179430622;179430621 |
N2A | 24178 | 72757;72758;72759 | chr2:178565896;178565895;178565894 | chr2:179430623;179430622;179430621 |
N2B | 17681 | 53266;53267;53268 | chr2:178565896;178565895;178565894 | chr2:179430623;179430622;179430621 |
Novex-1 | 17806 | 53641;53642;53643 | chr2:178565896;178565895;178565894 | chr2:179430623;179430622;179430621 |
Novex-2 | 17873 | 53842;53843;53844 | chr2:178565896;178565895;178565894 | chr2:179430623;179430622;179430621 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.015 | N | 0.259 | 0.151 | 0.168933306366 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 7.32654E-05 |
N/K | rs1299776307 | 0.473 | 0.684 | N | 0.325 | 0.134 | 0.148003135375 | gnomAD-4.0.0 | 1.59162E-06 | None | None | None | None | N | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2155 | likely_benign | 0.227 | benign | -0.195 | Destabilizing | 0.543 | D | 0.345 | neutral | None | None | None | None | N |
N/C | 0.2721 | likely_benign | 0.2768 | benign | 0.285 | Stabilizing | 0.996 | D | 0.4 | neutral | None | None | None | None | N |
N/D | 0.1349 | likely_benign | 0.1263 | benign | 0.124 | Stabilizing | 0.003 | N | 0.146 | neutral | N | 0.423643056 | None | None | N |
N/E | 0.3563 | ambiguous | 0.3528 | ambiguous | 0.072 | Stabilizing | 0.373 | N | 0.302 | neutral | None | None | None | None | N |
N/F | 0.5138 | ambiguous | 0.4992 | ambiguous | -0.695 | Destabilizing | 0.953 | D | 0.427 | neutral | None | None | None | None | N |
N/G | 0.1848 | likely_benign | 0.2023 | benign | -0.324 | Destabilizing | 0.001 | N | 0.119 | neutral | None | None | None | None | N |
N/H | 0.128 | likely_benign | 0.1219 | benign | -0.33 | Destabilizing | 0.015 | N | 0.259 | neutral | N | 0.474976409 | None | None | N |
N/I | 0.3086 | likely_benign | 0.2976 | benign | 0.048 | Stabilizing | 0.939 | D | 0.439 | neutral | N | 0.512287782 | None | None | N |
N/K | 0.3119 | likely_benign | 0.2826 | benign | 0.133 | Stabilizing | 0.684 | D | 0.325 | neutral | N | 0.469975566 | None | None | N |
N/L | 0.291 | likely_benign | 0.2939 | benign | 0.048 | Stabilizing | 0.91 | D | 0.448 | neutral | None | None | None | None | N |
N/M | 0.3074 | likely_benign | 0.311 | benign | 0.235 | Stabilizing | 0.996 | D | 0.381 | neutral | None | None | None | None | N |
N/P | 0.6389 | likely_pathogenic | 0.6768 | pathogenic | -0.008 | Destabilizing | 0.984 | D | 0.419 | neutral | None | None | None | None | N |
N/Q | 0.3093 | likely_benign | 0.3087 | benign | -0.251 | Destabilizing | 0.91 | D | 0.365 | neutral | None | None | None | None | N |
N/R | 0.4237 | ambiguous | 0.406 | ambiguous | 0.213 | Stabilizing | 0.742 | D | 0.348 | neutral | None | None | None | None | N |
N/S | 0.1118 | likely_benign | 0.1132 | benign | -0.024 | Destabilizing | 0.472 | N | 0.339 | neutral | N | 0.505088217 | None | None | N |
N/T | 0.1547 | likely_benign | 0.163 | benign | 0.05 | Stabilizing | 0.815 | D | 0.324 | neutral | N | 0.484940363 | None | None | N |
N/V | 0.2956 | likely_benign | 0.303 | benign | -0.008 | Destabilizing | 0.953 | D | 0.455 | neutral | None | None | None | None | N |
N/W | 0.7564 | likely_pathogenic | 0.7468 | pathogenic | -0.762 | Destabilizing | 0.996 | D | 0.472 | neutral | None | None | None | None | N |
N/Y | 0.1746 | likely_benign | 0.1572 | benign | -0.462 | Destabilizing | 0.792 | D | 0.418 | neutral | N | 0.489321682 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.