Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26747 | 80464;80465;80466 | chr2:178565893;178565892;178565891 | chr2:179430620;179430619;179430618 |
N2AB | 25106 | 75541;75542;75543 | chr2:178565893;178565892;178565891 | chr2:179430620;179430619;179430618 |
N2A | 24179 | 72760;72761;72762 | chr2:178565893;178565892;178565891 | chr2:179430620;179430619;179430618 |
N2B | 17682 | 53269;53270;53271 | chr2:178565893;178565892;178565891 | chr2:179430620;179430619;179430618 |
Novex-1 | 17807 | 53644;53645;53646 | chr2:178565893;178565892;178565891 | chr2:179430620;179430619;179430618 |
Novex-2 | 17874 | 53845;53846;53847 | chr2:178565893;178565892;178565891 | chr2:179430620;179430619;179430618 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs779100100 | -1.44 | 0.995 | D | 0.835 | 0.724 | 0.867892837264 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
L/I | rs779100100 | -1.44 | 0.995 | D | 0.835 | 0.724 | 0.867892837264 | gnomAD-4.0.0 | 3.18327E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77423E-05 | None | 0 | 0 | 2.85919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9772 | likely_pathogenic | 0.9747 | pathogenic | -2.62 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
L/C | 0.9478 | likely_pathogenic | 0.9371 | pathogenic | -2.276 | Highly Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -2.912 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/E | 0.9975 | likely_pathogenic | 0.9973 | pathogenic | -2.782 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
L/F | 0.8148 | likely_pathogenic | 0.8257 | pathogenic | -1.879 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.656153985 | None | None | N |
L/G | 0.9952 | likely_pathogenic | 0.9948 | pathogenic | -3.09 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/H | 0.9936 | likely_pathogenic | 0.9934 | pathogenic | -2.378 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | D | 0.672980563 | None | None | N |
L/I | 0.3227 | likely_benign | 0.3347 | benign | -1.298 | Destabilizing | 0.995 | D | 0.835 | deleterious | D | 0.645858377 | None | None | N |
L/K | 0.9946 | likely_pathogenic | 0.9947 | pathogenic | -2.011 | Highly Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | N |
L/M | 0.3677 | ambiguous | 0.3854 | ambiguous | -1.228 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/N | 0.9953 | likely_pathogenic | 0.995 | pathogenic | -2.199 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/P | 0.9966 | likely_pathogenic | 0.997 | pathogenic | -1.716 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.672980563 | None | None | N |
L/Q | 0.9865 | likely_pathogenic | 0.9864 | pathogenic | -2.249 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/R | 0.9891 | likely_pathogenic | 0.9885 | pathogenic | -1.48 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.672980563 | None | None | N |
L/S | 0.9959 | likely_pathogenic | 0.9955 | pathogenic | -2.902 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
L/T | 0.9735 | likely_pathogenic | 0.9717 | pathogenic | -2.631 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
L/V | 0.4357 | ambiguous | 0.422 | ambiguous | -1.716 | Destabilizing | 0.996 | D | 0.843 | deleterious | D | 0.599304006 | None | None | N |
L/W | 0.9846 | likely_pathogenic | 0.985 | pathogenic | -2.126 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/Y | 0.9884 | likely_pathogenic | 0.9891 | pathogenic | -1.89 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.