Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26748 | 80467;80468;80469 | chr2:178565890;178565889;178565888 | chr2:179430617;179430616;179430615 |
N2AB | 25107 | 75544;75545;75546 | chr2:178565890;178565889;178565888 | chr2:179430617;179430616;179430615 |
N2A | 24180 | 72763;72764;72765 | chr2:178565890;178565889;178565888 | chr2:179430617;179430616;179430615 |
N2B | 17683 | 53272;53273;53274 | chr2:178565890;178565889;178565888 | chr2:179430617;179430616;179430615 |
Novex-1 | 17808 | 53647;53648;53649 | chr2:178565890;178565889;178565888 | chr2:179430617;179430616;179430615 |
Novex-2 | 17875 | 53848;53849;53850 | chr2:178565890;178565889;178565888 | chr2:179430617;179430616;179430615 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.126 | 0.099 | 0.181679512989 | gnomAD-4.0.0 | 1.59159E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
T/R | None | None | 0.188 | N | 0.328 | 0.163 | 0.247322355667 | gnomAD-4.0.0 | 1.59161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85915E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0671 | likely_benign | 0.0683 | benign | -0.747 | Destabilizing | None | N | 0.126 | neutral | N | 0.476306892 | None | None | N |
T/C | 0.2991 | likely_benign | 0.3114 | benign | -0.408 | Destabilizing | 0.824 | D | 0.341 | neutral | None | None | None | None | N |
T/D | 0.4227 | ambiguous | 0.392 | ambiguous | 0.224 | Stabilizing | 0.081 | N | 0.332 | neutral | None | None | None | None | N |
T/E | 0.292 | likely_benign | 0.2722 | benign | 0.188 | Stabilizing | 0.149 | N | 0.27 | neutral | None | None | None | None | N |
T/F | 0.1932 | likely_benign | 0.197 | benign | -1.041 | Destabilizing | 0.38 | N | 0.361 | neutral | None | None | None | None | N |
T/G | 0.1845 | likely_benign | 0.1867 | benign | -0.942 | Destabilizing | 0.081 | N | 0.321 | neutral | None | None | None | None | N |
T/H | 0.2532 | likely_benign | 0.2471 | benign | -1.143 | Destabilizing | 0.824 | D | 0.343 | neutral | None | None | None | None | N |
T/I | 0.0868 | likely_benign | 0.0938 | benign | -0.334 | Destabilizing | 0.001 | N | 0.184 | neutral | N | 0.428515732 | None | None | N |
T/K | 0.2406 | likely_benign | 0.2211 | benign | -0.502 | Destabilizing | 0.002 | N | 0.184 | neutral | N | 0.41352485 | None | None | N |
T/L | 0.06 | likely_benign | 0.067 | benign | -0.334 | Destabilizing | 0.001 | N | 0.159 | neutral | None | None | None | None | N |
T/M | 0.0676 | likely_benign | 0.0679 | benign | -0.122 | Destabilizing | 0.38 | N | 0.342 | neutral | None | None | None | None | N |
T/N | 0.1031 | likely_benign | 0.0998 | benign | -0.343 | Destabilizing | 0.001 | N | 0.129 | neutral | None | None | None | None | N |
T/P | 0.1656 | likely_benign | 0.1632 | benign | -0.441 | Destabilizing | 0.484 | N | 0.349 | neutral | N | 0.509939463 | None | None | N |
T/Q | 0.1979 | likely_benign | 0.1951 | benign | -0.523 | Destabilizing | 0.38 | N | 0.348 | neutral | None | None | None | None | N |
T/R | 0.225 | likely_benign | 0.2011 | benign | -0.231 | Destabilizing | 0.188 | N | 0.328 | neutral | N | 0.470802285 | None | None | N |
T/S | 0.0944 | likely_benign | 0.0972 | benign | -0.648 | Destabilizing | 0.027 | N | 0.24 | neutral | N | 0.434286911 | None | None | N |
T/V | 0.074 | likely_benign | 0.0825 | benign | -0.441 | Destabilizing | 0.012 | N | 0.207 | neutral | None | None | None | None | N |
T/W | 0.5446 | ambiguous | 0.5299 | ambiguous | -0.972 | Destabilizing | 0.935 | D | 0.429 | neutral | None | None | None | None | N |
T/Y | 0.2651 | likely_benign | 0.2674 | benign | -0.728 | Destabilizing | 0.555 | D | 0.356 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.