Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26749 | 80470;80471;80472 | chr2:178565887;178565886;178565885 | chr2:179430614;179430613;179430612 |
N2AB | 25108 | 75547;75548;75549 | chr2:178565887;178565886;178565885 | chr2:179430614;179430613;179430612 |
N2A | 24181 | 72766;72767;72768 | chr2:178565887;178565886;178565885 | chr2:179430614;179430613;179430612 |
N2B | 17684 | 53275;53276;53277 | chr2:178565887;178565886;178565885 | chr2:179430614;179430613;179430612 |
Novex-1 | 17809 | 53650;53651;53652 | chr2:178565887;178565886;178565885 | chr2:179430614;179430613;179430612 |
Novex-2 | 17876 | 53851;53852;53853 | chr2:178565887;178565886;178565885 | chr2:179430614;179430613;179430612 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.997 | N | 0.703 | 0.439 | 0.403469152278 | gnomAD-4.0.0 | 1.36854E-06 | None | None | None | None | N | None | 2.98864E-05 | 2.23634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2996 | likely_benign | 0.2486 | benign | -0.263 | Destabilizing | 0.995 | D | 0.657 | neutral | N | 0.469594358 | None | None | N |
E/C | 0.9654 | likely_pathogenic | 0.9591 | pathogenic | 0.172 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/D | 0.5385 | ambiguous | 0.5039 | ambiguous | -0.318 | Destabilizing | 0.965 | D | 0.594 | neutral | N | 0.511820483 | None | None | N |
E/F | 0.9844 | likely_pathogenic | 0.9736 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
E/G | 0.5728 | likely_pathogenic | 0.4733 | ambiguous | -0.439 | Destabilizing | 1.0 | D | 0.611 | neutral | N | 0.498742658 | None | None | N |
E/H | 0.9149 | likely_pathogenic | 0.8859 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
E/I | 0.7644 | likely_pathogenic | 0.7308 | pathogenic | 0.155 | Stabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
E/K | 0.4864 | ambiguous | 0.425 | ambiguous | 0.452 | Stabilizing | 0.997 | D | 0.703 | prob.neutral | N | 0.49270227 | None | None | N |
E/L | 0.8727 | likely_pathogenic | 0.8337 | pathogenic | 0.155 | Stabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
E/M | 0.8549 | likely_pathogenic | 0.8113 | pathogenic | 0.306 | Stabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | N |
E/N | 0.7426 | likely_pathogenic | 0.7155 | pathogenic | 0.263 | Stabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/P | 0.6026 | likely_pathogenic | 0.631 | pathogenic | 0.036 | Stabilizing | 0.992 | D | 0.618 | neutral | None | None | None | None | N |
E/Q | 0.3463 | ambiguous | 0.3118 | benign | 0.263 | Stabilizing | 0.999 | D | 0.689 | prob.neutral | N | 0.479624445 | None | None | N |
E/R | 0.6863 | likely_pathogenic | 0.6251 | pathogenic | 0.554 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/S | 0.5142 | ambiguous | 0.4536 | ambiguous | 0.096 | Stabilizing | 0.997 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/T | 0.6099 | likely_pathogenic | 0.5533 | ambiguous | 0.234 | Stabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
E/V | 0.5323 | ambiguous | 0.489 | ambiguous | 0.036 | Stabilizing | 0.998 | D | 0.614 | neutral | N | 0.492399555 | None | None | N |
E/W | 0.9954 | likely_pathogenic | 0.9926 | pathogenic | -0.252 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/Y | 0.97 | likely_pathogenic | 0.9527 | pathogenic | -0.097 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.