Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26760 | 80503;80504;80505 | chr2:178565854;178565853;178565852 | chr2:179430581;179430580;179430579 |
N2AB | 25119 | 75580;75581;75582 | chr2:178565854;178565853;178565852 | chr2:179430581;179430580;179430579 |
N2A | 24192 | 72799;72800;72801 | chr2:178565854;178565853;178565852 | chr2:179430581;179430580;179430579 |
N2B | 17695 | 53308;53309;53310 | chr2:178565854;178565853;178565852 | chr2:179430581;179430580;179430579 |
Novex-1 | 17820 | 53683;53684;53685 | chr2:178565854;178565853;178565852 | chr2:179430581;179430580;179430579 |
Novex-2 | 17887 | 53884;53885;53886 | chr2:178565854;178565853;178565852 | chr2:179430581;179430580;179430579 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs778292712 | -1.34 | 0.974 | D | 0.46 | 0.404 | 0.20549828249 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 8.89E-06 | 0 |
E/D | rs778292712 | -1.34 | 0.974 | D | 0.46 | 0.404 | 0.20549828249 | gnomAD-4.0.0 | 5.47418E-06 | None | None | None | None | I | None | 5.97872E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79912E-06 | 3.4781E-05 | 1.65706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4636 | ambiguous | 0.4383 | ambiguous | -0.801 | Destabilizing | 0.997 | D | 0.68 | prob.neutral | N | 0.473620056 | None | None | I |
E/C | 0.9091 | likely_pathogenic | 0.9159 | pathogenic | -0.696 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
E/D | 0.7628 | likely_pathogenic | 0.7835 | pathogenic | -1.525 | Destabilizing | 0.974 | D | 0.46 | neutral | D | 0.530619074 | None | None | I |
E/F | 0.9536 | likely_pathogenic | 0.9529 | pathogenic | -1.039 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | I |
E/G | 0.6632 | likely_pathogenic | 0.6385 | pathogenic | -1.135 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.519098184 | None | None | I |
E/H | 0.8993 | likely_pathogenic | 0.9008 | pathogenic | -1.304 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
E/I | 0.5762 | likely_pathogenic | 0.5755 | pathogenic | 0.104 | Stabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | I |
E/K | 0.5197 | ambiguous | 0.4876 | ambiguous | -1.02 | Destabilizing | 0.998 | D | 0.544 | neutral | N | 0.481875716 | None | None | I |
E/L | 0.8269 | likely_pathogenic | 0.8134 | pathogenic | 0.104 | Stabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | I |
E/M | 0.7122 | likely_pathogenic | 0.6983 | pathogenic | 0.59 | Stabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | I |
E/N | 0.8333 | likely_pathogenic | 0.8364 | pathogenic | -1.237 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/P | 0.9979 | likely_pathogenic | 0.9977 | pathogenic | -0.177 | Destabilizing | 0.994 | D | 0.83 | deleterious | None | None | None | None | I |
E/Q | 0.2577 | likely_benign | 0.2375 | benign | -1.072 | Destabilizing | 0.999 | D | 0.623 | neutral | N | 0.484242346 | None | None | I |
E/R | 0.6889 | likely_pathogenic | 0.6656 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/S | 0.5584 | ambiguous | 0.5512 | ambiguous | -1.692 | Destabilizing | 0.997 | D | 0.603 | neutral | None | None | None | None | I |
E/T | 0.5995 | likely_pathogenic | 0.6049 | pathogenic | -1.394 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | I |
E/V | 0.3081 | likely_benign | 0.3096 | benign | -0.177 | Destabilizing | 0.998 | D | 0.833 | deleterious | N | 0.462041155 | None | None | I |
E/W | 0.9895 | likely_pathogenic | 0.9907 | pathogenic | -1.219 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
E/Y | 0.9471 | likely_pathogenic | 0.947 | pathogenic | -0.881 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.