Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26773 | 80542;80543;80544 | chr2:178565815;178565814;178565813 | chr2:179430542;179430541;179430540 |
N2AB | 25132 | 75619;75620;75621 | chr2:178565815;178565814;178565813 | chr2:179430542;179430541;179430540 |
N2A | 24205 | 72838;72839;72840 | chr2:178565815;178565814;178565813 | chr2:179430542;179430541;179430540 |
N2B | 17708 | 53347;53348;53349 | chr2:178565815;178565814;178565813 | chr2:179430542;179430541;179430540 |
Novex-1 | 17833 | 53722;53723;53724 | chr2:178565815;178565814;178565813 | chr2:179430542;179430541;179430540 |
Novex-2 | 17900 | 53923;53924;53925 | chr2:178565815;178565814;178565813 | chr2:179430542;179430541;179430540 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1036715959 | None | 0.012 | N | 0.155 | 0.061 | 0.176091768786 | gnomAD-4.0.0 | 6.84267E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99556E-07 | 0 | 0 |
D/N | None | None | 0.682 | N | 0.605 | 0.154 | 0.218845423259 | gnomAD-4.0.0 | 6.84268E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.51927E-05 | None | 0 | 0 | 0 | 0 | 0 |
D/Y | None | None | 0.979 | N | 0.78 | 0.388 | 0.491248951702 | gnomAD-4.0.0 | 6.84268E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99557E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1446 | likely_benign | 0.1367 | benign | -0.008 | Destabilizing | 0.518 | D | 0.6 | neutral | N | 0.461081527 | None | None | I |
D/C | 0.5525 | ambiguous | 0.5513 | ambiguous | -0.231 | Destabilizing | 0.996 | D | 0.8 | deleterious | None | None | None | None | I |
D/E | 0.1054 | likely_benign | 0.1065 | benign | -0.279 | Destabilizing | 0.012 | N | 0.155 | neutral | N | 0.379601491 | None | None | I |
D/F | 0.525 | ambiguous | 0.5064 | ambiguous | -0.048 | Destabilizing | 0.984 | D | 0.756 | deleterious | None | None | None | None | I |
D/G | 0.1653 | likely_benign | 0.1482 | benign | -0.121 | Destabilizing | 0.682 | D | 0.657 | prob.neutral | N | 0.508221736 | None | None | I |
D/H | 0.2839 | likely_benign | 0.2674 | benign | 0.608 | Stabilizing | 0.983 | D | 0.605 | neutral | N | 0.465969826 | None | None | I |
D/I | 0.3062 | likely_benign | 0.2937 | benign | 0.228 | Stabilizing | 0.953 | D | 0.788 | deleterious | None | None | None | None | I |
D/K | 0.3747 | ambiguous | 0.3514 | ambiguous | 0.371 | Stabilizing | 0.009 | N | 0.406 | neutral | None | None | None | None | I |
D/L | 0.3336 | likely_benign | 0.3241 | benign | 0.228 | Stabilizing | 0.909 | D | 0.686 | prob.delet. | None | None | None | None | I |
D/M | 0.4886 | ambiguous | 0.4854 | ambiguous | -0.014 | Destabilizing | 0.996 | D | 0.756 | deleterious | None | None | None | None | I |
D/N | 0.1014 | likely_benign | 0.0972 | benign | 0.105 | Stabilizing | 0.682 | D | 0.605 | neutral | N | 0.485806236 | None | None | I |
D/P | 0.7123 | likely_pathogenic | 0.6831 | pathogenic | 0.168 | Stabilizing | 0.953 | D | 0.613 | neutral | None | None | None | None | I |
D/Q | 0.2983 | likely_benign | 0.2945 | benign | 0.115 | Stabilizing | 0.204 | N | 0.431 | neutral | None | None | None | None | I |
D/R | 0.4418 | ambiguous | 0.42 | ambiguous | 0.648 | Stabilizing | 0.833 | D | 0.649 | prob.neutral | None | None | None | None | I |
D/S | 0.1173 | likely_benign | 0.1108 | benign | 0.003 | Stabilizing | 0.74 | D | 0.502 | neutral | None | None | None | None | I |
D/T | 0.1786 | likely_benign | 0.1778 | benign | 0.102 | Stabilizing | 0.909 | D | 0.639 | neutral | None | None | None | None | I |
D/V | 0.176 | likely_benign | 0.1689 | benign | 0.168 | Stabilizing | 0.883 | D | 0.675 | prob.neutral | N | 0.46394191 | None | None | I |
D/W | 0.8582 | likely_pathogenic | 0.8552 | pathogenic | 0.007 | Stabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | I |
D/Y | 0.2442 | likely_benign | 0.2284 | benign | 0.179 | Stabilizing | 0.979 | D | 0.78 | deleterious | N | 0.487833063 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.