Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26774 | 80545;80546;80547 | chr2:178565812;178565811;178565810 | chr2:179430539;179430538;179430537 |
N2AB | 25133 | 75622;75623;75624 | chr2:178565812;178565811;178565810 | chr2:179430539;179430538;179430537 |
N2A | 24206 | 72841;72842;72843 | chr2:178565812;178565811;178565810 | chr2:179430539;179430538;179430537 |
N2B | 17709 | 53350;53351;53352 | chr2:178565812;178565811;178565810 | chr2:179430539;179430538;179430537 |
Novex-1 | 17834 | 53725;53726;53727 | chr2:178565812;178565811;178565810 | chr2:179430539;179430538;179430537 |
Novex-2 | 17901 | 53926;53927;53928 | chr2:178565812;178565811;178565810 | chr2:179430539;179430538;179430537 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1272733739 | -0.207 | 0.813 | N | 0.549 | 0.361 | 0.372268306217 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/V | rs1272733739 | -0.207 | 0.813 | N | 0.549 | 0.361 | 0.372268306217 | gnomAD-4.0.0 | 6.36643E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 8.31901E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5354 | ambiguous | 0.5765 | pathogenic | -0.649 | Destabilizing | 0.996 | D | 0.585 | neutral | None | None | None | None | N |
A/D | 0.818 | likely_pathogenic | 0.8042 | pathogenic | -0.249 | Destabilizing | 0.682 | D | 0.771 | deleterious | N | 0.486724335 | None | None | N |
A/E | 0.6951 | likely_pathogenic | 0.6656 | pathogenic | -0.332 | Destabilizing | 0.74 | D | 0.689 | prob.delet. | None | None | None | None | N |
A/F | 0.6618 | likely_pathogenic | 0.6645 | pathogenic | -0.758 | Destabilizing | 0.984 | D | 0.853 | deleterious | None | None | None | None | N |
A/G | 0.191 | likely_benign | 0.1802 | benign | -0.687 | Destabilizing | 0.469 | N | 0.428 | neutral | N | 0.500605117 | None | None | N |
A/H | 0.8217 | likely_pathogenic | 0.8253 | pathogenic | -0.725 | Destabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | N |
A/I | 0.4879 | ambiguous | 0.5006 | ambiguous | -0.204 | Destabilizing | 0.953 | D | 0.711 | prob.delet. | None | None | None | None | N |
A/K | 0.8718 | likely_pathogenic | 0.8617 | pathogenic | -0.767 | Destabilizing | 0.74 | D | 0.687 | prob.delet. | None | None | None | None | N |
A/L | 0.436 | ambiguous | 0.4569 | ambiguous | -0.204 | Destabilizing | 0.74 | D | 0.665 | prob.neutral | None | None | None | None | N |
A/M | 0.424 | ambiguous | 0.4344 | ambiguous | -0.249 | Destabilizing | 0.996 | D | 0.697 | prob.delet. | None | None | None | None | N |
A/N | 0.6088 | likely_pathogenic | 0.6157 | pathogenic | -0.427 | Destabilizing | 0.909 | D | 0.737 | deleterious | None | None | None | None | N |
A/P | 0.154 | likely_benign | 0.1617 | benign | -0.265 | Destabilizing | 0.003 | N | 0.318 | neutral | N | 0.414679643 | None | None | N |
A/Q | 0.688 | likely_pathogenic | 0.6887 | pathogenic | -0.602 | Destabilizing | 0.953 | D | 0.706 | prob.delet. | None | None | None | None | N |
A/R | 0.8262 | likely_pathogenic | 0.81 | pathogenic | -0.417 | Destabilizing | 0.953 | D | 0.713 | prob.delet. | None | None | None | None | N |
A/S | 0.1331 | likely_benign | 0.1308 | benign | -0.782 | Destabilizing | 0.034 | N | 0.21 | neutral | N | 0.4303211 | None | None | N |
A/T | 0.202 | likely_benign | 0.2023 | benign | -0.766 | Destabilizing | 0.518 | D | 0.495 | neutral | N | 0.521556392 | None | None | N |
A/V | 0.2527 | likely_benign | 0.2618 | benign | -0.265 | Destabilizing | 0.813 | D | 0.549 | neutral | N | 0.470740783 | None | None | N |
A/W | 0.9228 | likely_pathogenic | 0.9257 | pathogenic | -1.006 | Destabilizing | 0.996 | D | 0.849 | deleterious | None | None | None | None | N |
A/Y | 0.7807 | likely_pathogenic | 0.783 | pathogenic | -0.615 | Destabilizing | 0.984 | D | 0.853 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.