Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26778 | 80557;80558;80559 | chr2:178565800;178565799;178565798 | chr2:179430527;179430526;179430525 |
N2AB | 25137 | 75634;75635;75636 | chr2:178565800;178565799;178565798 | chr2:179430527;179430526;179430525 |
N2A | 24210 | 72853;72854;72855 | chr2:178565800;178565799;178565798 | chr2:179430527;179430526;179430525 |
N2B | 17713 | 53362;53363;53364 | chr2:178565800;178565799;178565798 | chr2:179430527;179430526;179430525 |
Novex-1 | 17838 | 53737;53738;53739 | chr2:178565800;178565799;178565798 | chr2:179430527;179430526;179430525 |
Novex-2 | 17905 | 53938;53939;53940 | chr2:178565800;178565799;178565798 | chr2:179430527;179430526;179430525 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | rs1463558062 | -0.433 | 0.186 | N | 0.6 | 0.154 | 0.289474373501 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
A/D | rs1463558062 | -0.433 | 0.186 | N | 0.6 | 0.154 | 0.289474373501 | gnomAD-4.0.0 | 4.10564E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39738E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3334 | likely_benign | 0.3769 | ambiguous | -0.935 | Destabilizing | 0.823 | D | 0.383 | neutral | None | None | None | None | N |
A/D | 0.8414 | likely_pathogenic | 0.8046 | pathogenic | -1.182 | Destabilizing | 0.186 | N | 0.6 | neutral | N | 0.510723323 | None | None | N |
A/E | 0.7418 | likely_pathogenic | 0.7047 | pathogenic | -1.302 | Destabilizing | 0.08 | N | 0.535 | neutral | None | None | None | None | N |
A/F | 0.6299 | likely_pathogenic | 0.5854 | pathogenic | -1.226 | Destabilizing | 0.378 | N | 0.679 | prob.neutral | None | None | None | None | N |
A/G | 0.2118 | likely_benign | 0.2143 | benign | -0.999 | Destabilizing | 0.061 | N | 0.343 | neutral | N | 0.482806003 | None | None | N |
A/H | 0.8436 | likely_pathogenic | 0.8381 | pathogenic | -0.999 | Destabilizing | 0.823 | D | 0.652 | prob.neutral | None | None | None | None | N |
A/I | 0.5283 | ambiguous | 0.4751 | ambiguous | -0.677 | Destabilizing | 0.08 | N | 0.525 | neutral | None | None | None | None | N |
A/K | 0.9275 | likely_pathogenic | 0.9165 | pathogenic | -1.178 | Destabilizing | 0.08 | N | 0.546 | neutral | None | None | None | None | N |
A/L | 0.4059 | ambiguous | 0.3636 | ambiguous | -0.677 | Destabilizing | 0.001 | N | 0.337 | neutral | None | None | None | None | N |
A/M | 0.3691 | ambiguous | 0.3378 | benign | -0.505 | Destabilizing | 0.378 | N | 0.479 | neutral | None | None | None | None | N |
A/N | 0.69 | likely_pathogenic | 0.6533 | pathogenic | -0.823 | Destabilizing | 0.233 | N | 0.576 | neutral | None | None | None | None | N |
A/P | 0.9718 | likely_pathogenic | 0.9676 | pathogenic | -0.703 | Destabilizing | 0.314 | N | 0.54 | neutral | N | 0.463505379 | None | None | N |
A/Q | 0.7282 | likely_pathogenic | 0.7261 | pathogenic | -1.14 | Destabilizing | 0.378 | N | 0.581 | neutral | None | None | None | None | N |
A/R | 0.8769 | likely_pathogenic | 0.8584 | pathogenic | -0.624 | Destabilizing | 0.378 | N | 0.537 | neutral | None | None | None | None | N |
A/S | 0.0756 | likely_benign | 0.0822 | benign | -1.061 | Destabilizing | None | N | 0.108 | neutral | N | 0.396533813 | None | None | N |
A/T | 0.1198 | likely_benign | 0.1111 | benign | -1.11 | Destabilizing | 0.061 | N | 0.341 | neutral | N | 0.501565122 | None | None | N |
A/V | 0.2498 | likely_benign | 0.2216 | benign | -0.703 | Destabilizing | 0.061 | N | 0.365 | neutral | N | 0.477418826 | None | None | N |
A/W | 0.9151 | likely_pathogenic | 0.9076 | pathogenic | -1.378 | Destabilizing | 0.934 | D | 0.736 | deleterious | None | None | None | None | N |
A/Y | 0.783 | likely_pathogenic | 0.7561 | pathogenic | -1.066 | Destabilizing | 0.552 | D | 0.676 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.