Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26779 | 80560;80561;80562 | chr2:178565797;178565796;178565795 | chr2:179430524;179430523;179430522 |
N2AB | 25138 | 75637;75638;75639 | chr2:178565797;178565796;178565795 | chr2:179430524;179430523;179430522 |
N2A | 24211 | 72856;72857;72858 | chr2:178565797;178565796;178565795 | chr2:179430524;179430523;179430522 |
N2B | 17714 | 53365;53366;53367 | chr2:178565797;178565796;178565795 | chr2:179430524;179430523;179430522 |
Novex-1 | 17839 | 53740;53741;53742 | chr2:178565797;178565796;178565795 | chr2:179430524;179430523;179430522 |
Novex-2 | 17906 | 53941;53942;53943 | chr2:178565797;178565796;178565795 | chr2:179430524;179430523;179430522 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs760599182 | -0.12 | None | N | 0.361 | 0.033 | 0.223847106136 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/D | rs760599182 | -0.12 | None | N | 0.361 | 0.033 | 0.223847106136 | gnomAD-4.0.0 | 6.36647E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.73115E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3332 | likely_benign | 0.3239 | benign | -0.49 | Destabilizing | 0.581 | D | 0.649 | prob.neutral | N | 0.509008383 | None | None | N |
E/C | 0.9227 | likely_pathogenic | 0.9328 | pathogenic | -0.206 | Destabilizing | 0.993 | D | 0.767 | deleterious | None | None | None | None | N |
E/D | 0.2593 | likely_benign | 0.3174 | benign | -0.502 | Destabilizing | None | N | 0.361 | neutral | N | 0.467759193 | None | None | N |
E/F | 0.9025 | likely_pathogenic | 0.9197 | pathogenic | -0.308 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
E/G | 0.4175 | ambiguous | 0.349 | ambiguous | -0.711 | Destabilizing | 0.822 | D | 0.399 | neutral | N | 0.518110655 | None | None | N |
E/H | 0.8319 | likely_pathogenic | 0.8496 | pathogenic | -0.149 | Destabilizing | 0.995 | D | 0.571 | neutral | None | None | None | None | N |
E/I | 0.7152 | likely_pathogenic | 0.7838 | pathogenic | 0.068 | Stabilizing | 0.919 | D | 0.689 | prob.delet. | None | None | None | None | N |
E/K | 0.5654 | likely_pathogenic | 0.5676 | pathogenic | 0.045 | Stabilizing | 0.72 | D | 0.625 | neutral | N | 0.479011653 | None | None | N |
E/L | 0.6708 | likely_pathogenic | 0.7321 | pathogenic | 0.068 | Stabilizing | 0.919 | D | 0.689 | prob.delet. | None | None | None | None | N |
E/M | 0.6356 | likely_pathogenic | 0.6743 | pathogenic | 0.157 | Stabilizing | 0.959 | D | 0.638 | neutral | None | None | None | None | N |
E/N | 0.5322 | ambiguous | 0.5684 | pathogenic | -0.252 | Destabilizing | 0.565 | D | 0.59 | neutral | None | None | None | None | N |
E/P | 0.985 | likely_pathogenic | 0.9875 | pathogenic | -0.097 | Destabilizing | 0.628 | D | 0.573 | neutral | None | None | None | None | N |
E/Q | 0.2396 | likely_benign | 0.2276 | benign | -0.213 | Destabilizing | 0.929 | D | 0.531 | neutral | N | 0.468478268 | None | None | N |
E/R | 0.7165 | likely_pathogenic | 0.7179 | pathogenic | 0.305 | Stabilizing | 0.96 | D | 0.621 | neutral | None | None | None | None | N |
E/S | 0.3516 | ambiguous | 0.3526 | ambiguous | -0.433 | Destabilizing | 0.648 | D | 0.632 | neutral | None | None | None | None | N |
E/T | 0.5279 | ambiguous | 0.5807 | pathogenic | -0.259 | Destabilizing | 0.899 | D | 0.565 | neutral | None | None | None | None | N |
E/V | 0.4857 | ambiguous | 0.5589 | ambiguous | -0.097 | Destabilizing | 0.859 | D | 0.604 | neutral | N | 0.487151954 | None | None | N |
E/W | 0.9796 | likely_pathogenic | 0.984 | pathogenic | -0.141 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
E/Y | 0.8787 | likely_pathogenic | 0.8966 | pathogenic | -0.073 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.