Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26785 | 80578;80579;80580 | chr2:178565779;178565778;178565777 | chr2:179430506;179430505;179430504 |
N2AB | 25144 | 75655;75656;75657 | chr2:178565779;178565778;178565777 | chr2:179430506;179430505;179430504 |
N2A | 24217 | 72874;72875;72876 | chr2:178565779;178565778;178565777 | chr2:179430506;179430505;179430504 |
N2B | 17720 | 53383;53384;53385 | chr2:178565779;178565778;178565777 | chr2:179430506;179430505;179430504 |
Novex-1 | 17845 | 53758;53759;53760 | chr2:178565779;178565778;178565777 | chr2:179430506;179430505;179430504 |
Novex-2 | 17912 | 53959;53960;53961 | chr2:178565779;178565778;178565777 | chr2:179430506;179430505;179430504 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 0.996 | N | 0.692 | 0.395 | 0.284539287134 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
G/R | None | None | 1.0 | N | 0.89 | 0.47 | 0.445007932271 | gnomAD-4.0.0 | 4.10571E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39745E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2035 | likely_benign | 0.1974 | benign | -0.952 | Destabilizing | 0.996 | D | 0.692 | prob.neutral | N | 0.469647264 | None | None | N |
G/C | 0.3774 | ambiguous | 0.3766 | ambiguous | -1.148 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
G/D | 0.6171 | likely_pathogenic | 0.6328 | pathogenic | -2.243 | Highly Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
G/E | 0.4605 | ambiguous | 0.4397 | ambiguous | -2.213 | Highly Destabilizing | 0.96 | D | 0.647 | neutral | N | 0.517401366 | None | None | N |
G/F | 0.7907 | likely_pathogenic | 0.776 | pathogenic | -1.043 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
G/H | 0.6935 | likely_pathogenic | 0.6921 | pathogenic | -1.89 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
G/I | 0.5494 | ambiguous | 0.5142 | ambiguous | -0.29 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
G/K | 0.6126 | likely_pathogenic | 0.6049 | pathogenic | -1.721 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
G/L | 0.5807 | likely_pathogenic | 0.558 | ambiguous | -0.29 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
G/M | 0.6596 | likely_pathogenic | 0.6343 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
G/N | 0.5616 | ambiguous | 0.5823 | pathogenic | -1.56 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
G/P | 0.9563 | likely_pathogenic | 0.956 | pathogenic | -0.469 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
G/Q | 0.4888 | ambiguous | 0.4583 | ambiguous | -1.631 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
G/R | 0.4549 | ambiguous | 0.4228 | ambiguous | -1.47 | Destabilizing | 1.0 | D | 0.89 | deleterious | N | 0.518921519 | None | None | N |
G/S | 0.1641 | likely_benign | 0.162 | benign | -1.76 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
G/T | 0.3524 | ambiguous | 0.3381 | benign | -1.657 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
G/V | 0.3855 | ambiguous | 0.3564 | ambiguous | -0.469 | Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.481523776 | None | None | N |
G/W | 0.7045 | likely_pathogenic | 0.686 | pathogenic | -1.639 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
G/Y | 0.7167 | likely_pathogenic | 0.7003 | pathogenic | -1.181 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.