Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26787 | 80584;80585;80586 | chr2:178565773;178565772;178565771 | chr2:179430500;179430499;179430498 |
N2AB | 25146 | 75661;75662;75663 | chr2:178565773;178565772;178565771 | chr2:179430500;179430499;179430498 |
N2A | 24219 | 72880;72881;72882 | chr2:178565773;178565772;178565771 | chr2:179430500;179430499;179430498 |
N2B | 17722 | 53389;53390;53391 | chr2:178565773;178565772;178565771 | chr2:179430500;179430499;179430498 |
Novex-1 | 17847 | 53764;53765;53766 | chr2:178565773;178565772;178565771 | chr2:179430500;179430499;179430498 |
Novex-2 | 17914 | 53965;53966;53967 | chr2:178565773;178565772;178565771 | chr2:179430500;179430499;179430498 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.942 | N | 0.771 | 0.281 | 0.639482846592 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
V/I | None | None | 0.014 | N | 0.423 | 0.047 | 0.344483371355 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.94099E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8273 | likely_pathogenic | 0.8117 | pathogenic | -1.998 | Destabilizing | 0.014 | N | 0.383 | neutral | N | 0.482179646 | None | None | N |
V/C | 0.952 | likely_pathogenic | 0.9485 | pathogenic | -1.537 | Destabilizing | 0.994 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/D | 0.9885 | likely_pathogenic | 0.9862 | pathogenic | -2.634 | Highly Destabilizing | 0.942 | D | 0.809 | deleterious | N | 0.489062328 | None | None | N |
V/E | 0.9751 | likely_pathogenic | 0.9733 | pathogenic | -2.471 | Highly Destabilizing | 0.956 | D | 0.772 | deleterious | None | None | None | None | N |
V/F | 0.7209 | likely_pathogenic | 0.6716 | pathogenic | -1.2 | Destabilizing | 0.942 | D | 0.771 | deleterious | N | 0.496839667 | None | None | N |
V/G | 0.8419 | likely_pathogenic | 0.8212 | pathogenic | -2.484 | Highly Destabilizing | 0.014 | N | 0.523 | neutral | N | 0.478466491 | None | None | N |
V/H | 0.9939 | likely_pathogenic | 0.9937 | pathogenic | -2.284 | Highly Destabilizing | 0.998 | D | 0.806 | deleterious | None | None | None | None | N |
V/I | 0.0895 | likely_benign | 0.0936 | benign | -0.668 | Destabilizing | 0.014 | N | 0.423 | neutral | N | 0.455646405 | None | None | N |
V/K | 0.9858 | likely_pathogenic | 0.9859 | pathogenic | -1.816 | Destabilizing | 0.956 | D | 0.778 | deleterious | None | None | None | None | N |
V/L | 0.3923 | ambiguous | 0.4262 | ambiguous | -0.668 | Destabilizing | 0.489 | N | 0.733 | prob.delet. | N | 0.384044518 | None | None | N |
V/M | 0.5221 | ambiguous | 0.5115 | ambiguous | -0.664 | Destabilizing | 0.956 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/N | 0.9615 | likely_pathogenic | 0.9576 | pathogenic | -1.969 | Destabilizing | 0.956 | D | 0.817 | deleterious | None | None | None | None | N |
V/P | 0.9333 | likely_pathogenic | 0.9372 | pathogenic | -1.083 | Destabilizing | 0.978 | D | 0.79 | deleterious | None | None | None | None | N |
V/Q | 0.9803 | likely_pathogenic | 0.9807 | pathogenic | -1.896 | Destabilizing | 0.978 | D | 0.779 | deleterious | None | None | None | None | N |
V/R | 0.9804 | likely_pathogenic | 0.9811 | pathogenic | -1.536 | Destabilizing | 0.978 | D | 0.821 | deleterious | None | None | None | None | N |
V/S | 0.9463 | likely_pathogenic | 0.9383 | pathogenic | -2.526 | Highly Destabilizing | 0.754 | D | 0.753 | deleterious | None | None | None | None | N |
V/T | 0.8905 | likely_pathogenic | 0.8894 | pathogenic | -2.238 | Highly Destabilizing | 0.86 | D | 0.746 | deleterious | None | None | None | None | N |
V/W | 0.9918 | likely_pathogenic | 0.9894 | pathogenic | -1.723 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
V/Y | 0.9656 | likely_pathogenic | 0.9592 | pathogenic | -1.357 | Destabilizing | 0.993 | D | 0.748 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.