Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26789 | 80590;80591;80592 | chr2:178565767;178565766;178565765 | chr2:179430494;179430493;179430492 |
N2AB | 25148 | 75667;75668;75669 | chr2:178565767;178565766;178565765 | chr2:179430494;179430493;179430492 |
N2A | 24221 | 72886;72887;72888 | chr2:178565767;178565766;178565765 | chr2:179430494;179430493;179430492 |
N2B | 17724 | 53395;53396;53397 | chr2:178565767;178565766;178565765 | chr2:179430494;179430493;179430492 |
Novex-1 | 17849 | 53770;53771;53772 | chr2:178565767;178565766;178565765 | chr2:179430494;179430493;179430492 |
Novex-2 | 17916 | 53971;53972;53973 | chr2:178565767;178565766;178565765 | chr2:179430494;179430493;179430492 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1403788853 | None | 0.998 | N | 0.758 | 0.262 | 0.606186980318 | gnomAD-4.0.0 | 2.05286E-06 | None | None | None | None | I | None | 8.96915E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8042 | likely_pathogenic | 0.7448 | pathogenic | -1.745 | Destabilizing | 0.997 | D | 0.689 | prob.neutral | None | None | None | None | I |
L/C | 0.8503 | likely_pathogenic | 0.7972 | pathogenic | -1.386 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
L/D | 0.9956 | likely_pathogenic | 0.993 | pathogenic | -0.653 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
L/E | 0.9704 | likely_pathogenic | 0.9514 | pathogenic | -0.567 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
L/F | 0.6066 | likely_pathogenic | 0.5004 | ambiguous | -1.034 | Destabilizing | 0.998 | D | 0.758 | deleterious | N | 0.441884887 | None | None | I |
L/G | 0.9693 | likely_pathogenic | 0.9579 | pathogenic | -2.142 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
L/H | 0.9306 | likely_pathogenic | 0.8917 | pathogenic | -1.169 | Destabilizing | 1.0 | D | 0.867 | deleterious | N | 0.521407251 | None | None | I |
L/I | 0.1494 | likely_benign | 0.1305 | benign | -0.694 | Destabilizing | 0.762 | D | 0.582 | neutral | N | 0.415199718 | None | None | I |
L/K | 0.9356 | likely_pathogenic | 0.9064 | pathogenic | -1.15 | Destabilizing | 0.995 | D | 0.861 | deleterious | None | None | None | None | I |
L/M | 0.2964 | likely_benign | 0.2485 | benign | -0.738 | Destabilizing | 0.996 | D | 0.759 | deleterious | None | None | None | None | I |
L/N | 0.971 | likely_pathogenic | 0.9566 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
L/P | 0.9022 | likely_pathogenic | 0.85 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.884 | deleterious | N | 0.475442888 | None | None | I |
L/Q | 0.8926 | likely_pathogenic | 0.8292 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
L/R | 0.8985 | likely_pathogenic | 0.8534 | pathogenic | -0.718 | Destabilizing | 0.999 | D | 0.885 | deleterious | N | 0.476537026 | None | None | I |
L/S | 0.9502 | likely_pathogenic | 0.9178 | pathogenic | -1.962 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
L/T | 0.8417 | likely_pathogenic | 0.7831 | pathogenic | -1.725 | Destabilizing | 0.997 | D | 0.799 | deleterious | None | None | None | None | I |
L/V | 0.1223 | likely_benign | 0.1106 | benign | -1.015 | Destabilizing | 0.102 | N | 0.342 | neutral | N | 0.318342388 | None | None | I |
L/W | 0.8708 | likely_pathogenic | 0.8071 | pathogenic | -1.083 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
L/Y | 0.9073 | likely_pathogenic | 0.8677 | pathogenic | -0.864 | Destabilizing | 0.997 | D | 0.874 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.