Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2680 | 8263;8264;8265 | chr2:178771289;178771288;178771287 | chr2:179636016;179636015;179636014 |
N2AB | 2680 | 8263;8264;8265 | chr2:178771289;178771288;178771287 | chr2:179636016;179636015;179636014 |
N2A | 2680 | 8263;8264;8265 | chr2:178771289;178771288;178771287 | chr2:179636016;179636015;179636014 |
N2B | 2634 | 8125;8126;8127 | chr2:178771289;178771288;178771287 | chr2:179636016;179636015;179636014 |
Novex-1 | 2634 | 8125;8126;8127 | chr2:178771289;178771288;178771287 | chr2:179636016;179636015;179636014 |
Novex-2 | 2634 | 8125;8126;8127 | chr2:178771289;178771288;178771287 | chr2:179636016;179636015;179636014 |
Novex-3 | 2680 | 8263;8264;8265 | chr2:178771289;178771288;178771287 | chr2:179636016;179636015;179636014 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.002 | N | 0.093 | 0.064 | 0.0954503805726 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4866 | ambiguous | 0.5039 | ambiguous | -0.983 | Destabilizing | 0.836 | D | 0.37 | neutral | None | None | None | None | N |
A/D | 0.1803 | likely_benign | 0.1848 | benign | -1.522 | Destabilizing | 0.351 | N | 0.41 | neutral | N | 0.323328426 | None | None | N |
A/E | 0.1603 | likely_benign | 0.1606 | benign | -1.64 | Destabilizing | 0.418 | N | 0.365 | neutral | None | None | None | None | N |
A/F | 0.2263 | likely_benign | 0.2427 | benign | -1.333 | Destabilizing | 0.716 | D | 0.42 | neutral | None | None | None | None | N |
A/G | 0.1389 | likely_benign | 0.1385 | benign | -0.92 | Destabilizing | 0.183 | N | 0.301 | neutral | N | 0.347960948 | None | None | N |
A/H | 0.3599 | ambiguous | 0.3742 | ambiguous | -0.873 | Destabilizing | 0.983 | D | 0.39 | neutral | None | None | None | None | N |
A/I | 0.1381 | likely_benign | 0.1609 | benign | -0.63 | Destabilizing | None | N | 0.123 | neutral | None | None | None | None | N |
A/K | 0.2945 | likely_benign | 0.295 | benign | -0.999 | Destabilizing | 0.418 | N | 0.363 | neutral | None | None | None | None | N |
A/L | 0.1393 | likely_benign | 0.1493 | benign | -0.63 | Destabilizing | 0.061 | N | 0.285 | neutral | None | None | None | None | N |
A/M | 0.1591 | likely_benign | 0.1762 | benign | -0.378 | Destabilizing | 0.716 | D | 0.358 | neutral | None | None | None | None | N |
A/N | 0.1426 | likely_benign | 0.1507 | benign | -0.771 | Destabilizing | 0.418 | N | 0.433 | neutral | None | None | None | None | N |
A/P | 0.3278 | likely_benign | 0.2946 | benign | -0.65 | Destabilizing | 0.794 | D | 0.402 | neutral | N | 0.344279689 | None | None | N |
A/Q | 0.2466 | likely_benign | 0.2483 | benign | -1.132 | Destabilizing | 0.836 | D | 0.361 | neutral | None | None | None | None | N |
A/R | 0.2915 | likely_benign | 0.2834 | benign | -0.441 | Destabilizing | 0.716 | D | 0.376 | neutral | None | None | None | None | N |
A/S | 0.0824 | likely_benign | 0.0829 | benign | -0.981 | Destabilizing | 0.021 | N | 0.131 | neutral | N | 0.34620646 | None | None | N |
A/T | 0.0728 | likely_benign | 0.0777 | benign | -1.033 | Destabilizing | 0.002 | N | 0.093 | neutral | N | 0.348339449 | None | None | N |
A/V | 0.0846 | likely_benign | 0.0926 | benign | -0.65 | Destabilizing | 0.001 | N | 0.093 | neutral | N | 0.316512458 | None | None | N |
A/W | 0.6878 | likely_pathogenic | 0.7042 | pathogenic | -1.487 | Destabilizing | 0.983 | D | 0.44 | neutral | None | None | None | None | N |
A/Y | 0.3657 | ambiguous | 0.3855 | ambiguous | -1.131 | Destabilizing | 0.836 | D | 0.415 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.