Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26812 | 80659;80660;80661 | chr2:178565698;178565697;178565696 | chr2:179430425;179430424;179430423 |
N2AB | 25171 | 75736;75737;75738 | chr2:178565698;178565697;178565696 | chr2:179430425;179430424;179430423 |
N2A | 24244 | 72955;72956;72957 | chr2:178565698;178565697;178565696 | chr2:179430425;179430424;179430423 |
N2B | 17747 | 53464;53465;53466 | chr2:178565698;178565697;178565696 | chr2:179430425;179430424;179430423 |
Novex-1 | 17872 | 53839;53840;53841 | chr2:178565698;178565697;178565696 | chr2:179430425;179430424;179430423 |
Novex-2 | 17939 | 54040;54041;54042 | chr2:178565698;178565697;178565696 | chr2:179430425;179430424;179430423 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.13 | 0.177 | 0.126345400529 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8165 | likely_pathogenic | 0.7961 | pathogenic | -1.847 | Destabilizing | 0.027 | N | 0.529 | neutral | N | 0.468074198 | None | None | N |
V/C | 0.882 | likely_pathogenic | 0.872 | pathogenic | -1.1 | Destabilizing | 0.935 | D | 0.654 | neutral | None | None | None | None | N |
V/D | 0.9667 | likely_pathogenic | 0.9663 | pathogenic | -2.152 | Highly Destabilizing | 0.317 | N | 0.727 | prob.delet. | N | 0.509843463 | None | None | N |
V/E | 0.941 | likely_pathogenic | 0.939 | pathogenic | -1.973 | Destabilizing | 0.38 | N | 0.705 | prob.neutral | None | None | None | None | N |
V/F | 0.5969 | likely_pathogenic | 0.5594 | ambiguous | -1.169 | Destabilizing | 0.317 | N | 0.697 | prob.neutral | N | 0.520020384 | None | None | N |
V/G | 0.8294 | likely_pathogenic | 0.8329 | pathogenic | -2.34 | Highly Destabilizing | 0.117 | N | 0.733 | prob.delet. | N | 0.488996195 | None | None | N |
V/H | 0.9633 | likely_pathogenic | 0.962 | pathogenic | -2.072 | Highly Destabilizing | 0.935 | D | 0.702 | prob.neutral | None | None | None | None | N |
V/I | 0.0541 | likely_benign | 0.0506 | benign | -0.494 | Destabilizing | None | N | 0.13 | neutral | N | 0.325191003 | None | None | N |
V/K | 0.9592 | likely_pathogenic | 0.9581 | pathogenic | -1.467 | Destabilizing | 0.38 | N | 0.704 | prob.neutral | None | None | None | None | N |
V/L | 0.1747 | likely_benign | 0.174 | benign | -0.494 | Destabilizing | 0.004 | N | 0.351 | neutral | N | 0.412834204 | None | None | N |
V/M | 0.3548 | ambiguous | 0.3358 | benign | -0.337 | Destabilizing | 0.38 | N | 0.649 | neutral | None | None | None | None | N |
V/N | 0.7809 | likely_pathogenic | 0.7702 | pathogenic | -1.641 | Destabilizing | 0.38 | N | 0.715 | prob.delet. | None | None | None | None | N |
V/P | 0.7873 | likely_pathogenic | 0.7857 | pathogenic | -0.916 | Destabilizing | 0.555 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/Q | 0.9297 | likely_pathogenic | 0.9294 | pathogenic | -1.551 | Destabilizing | 0.555 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/R | 0.9417 | likely_pathogenic | 0.9404 | pathogenic | -1.23 | Destabilizing | 0.38 | N | 0.727 | prob.delet. | None | None | None | None | N |
V/S | 0.8484 | likely_pathogenic | 0.8268 | pathogenic | -2.25 | Highly Destabilizing | 0.081 | N | 0.663 | neutral | None | None | None | None | N |
V/T | 0.7893 | likely_pathogenic | 0.7648 | pathogenic | -1.937 | Destabilizing | 0.001 | N | 0.23 | neutral | None | None | None | None | N |
V/W | 0.9723 | likely_pathogenic | 0.9708 | pathogenic | -1.672 | Destabilizing | 0.935 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/Y | 0.9115 | likely_pathogenic | 0.9041 | pathogenic | -1.262 | Destabilizing | 0.555 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.