Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26818 | 80677;80678;80679 | chr2:178565680;178565679;178565678 | chr2:179430407;179430406;179430405 |
N2AB | 25177 | 75754;75755;75756 | chr2:178565680;178565679;178565678 | chr2:179430407;179430406;179430405 |
N2A | 24250 | 72973;72974;72975 | chr2:178565680;178565679;178565678 | chr2:179430407;179430406;179430405 |
N2B | 17753 | 53482;53483;53484 | chr2:178565680;178565679;178565678 | chr2:179430407;179430406;179430405 |
Novex-1 | 17878 | 53857;53858;53859 | chr2:178565680;178565679;178565678 | chr2:179430407;179430406;179430405 |
Novex-2 | 17945 | 54058;54059;54060 | chr2:178565680;178565679;178565678 | chr2:179430407;179430406;179430405 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs771164870 | -1.881 | 0.998 | N | 0.676 | 0.41 | 0.373357554552 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/D | rs771164870 | -1.881 | 0.998 | N | 0.676 | 0.41 | 0.373357554552 | gnomAD-4.0.0 | 1.59158E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8317 | likely_pathogenic | 0.7392 | pathogenic | -1.863 | Destabilizing | 1.0 | D | 0.761 | deleterious | D | 0.528772649 | None | None | N |
E/C | 0.9785 | likely_pathogenic | 0.9715 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
E/D | 0.7228 | likely_pathogenic | 0.6547 | pathogenic | -1.685 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | N | 0.485575927 | None | None | N |
E/F | 0.9891 | likely_pathogenic | 0.9832 | pathogenic | -1.594 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
E/G | 0.8932 | likely_pathogenic | 0.8345 | pathogenic | -2.222 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.530547076 | None | None | N |
E/H | 0.9614 | likely_pathogenic | 0.9512 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/I | 0.9725 | likely_pathogenic | 0.9531 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
E/K | 0.9289 | likely_pathogenic | 0.8993 | pathogenic | -1.663 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.516148896 | None | None | N |
E/L | 0.9531 | likely_pathogenic | 0.933 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
E/M | 0.9487 | likely_pathogenic | 0.9202 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
E/N | 0.9601 | likely_pathogenic | 0.9356 | pathogenic | -1.788 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
E/P | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -1.156 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
E/Q | 0.6395 | likely_pathogenic | 0.5562 | ambiguous | -1.517 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.47038128 | None | None | N |
E/R | 0.9479 | likely_pathogenic | 0.9336 | pathogenic | -1.469 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/S | 0.8641 | likely_pathogenic | 0.7875 | pathogenic | -2.446 | Highly Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/T | 0.9497 | likely_pathogenic | 0.9132 | pathogenic | -2.097 | Highly Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
E/V | 0.9231 | likely_pathogenic | 0.8802 | pathogenic | -1.156 | Destabilizing | 1.0 | D | 0.804 | deleterious | N | 0.521139327 | None | None | N |
E/W | 0.9933 | likely_pathogenic | 0.9915 | pathogenic | -1.655 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
E/Y | 0.9787 | likely_pathogenic | 0.9714 | pathogenic | -1.41 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.