Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26820 | 80683;80684;80685 | chr2:178565674;178565673;178565672 | chr2:179430401;179430400;179430399 |
N2AB | 25179 | 75760;75761;75762 | chr2:178565674;178565673;178565672 | chr2:179430401;179430400;179430399 |
N2A | 24252 | 72979;72980;72981 | chr2:178565674;178565673;178565672 | chr2:179430401;179430400;179430399 |
N2B | 17755 | 53488;53489;53490 | chr2:178565674;178565673;178565672 | chr2:179430401;179430400;179430399 |
Novex-1 | 17880 | 53863;53864;53865 | chr2:178565674;178565673;178565672 | chr2:179430401;179430400;179430399 |
Novex-2 | 17947 | 54064;54065;54066 | chr2:178565674;178565673;178565672 | chr2:179430401;179430400;179430399 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.982 | N | 0.502 | 0.3 | 0.227260227426 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3818 | ambiguous | 0.3558 | ambiguous | -1.139 | Destabilizing | 0.989 | D | 0.567 | neutral | None | None | None | None | N |
Q/C | 0.6388 | likely_pathogenic | 0.616 | pathogenic | -0.627 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
Q/D | 0.924 | likely_pathogenic | 0.9087 | pathogenic | -1.979 | Destabilizing | 0.994 | D | 0.505 | neutral | None | None | None | None | N |
Q/E | 0.2033 | likely_benign | 0.1839 | benign | -1.718 | Destabilizing | 0.987 | D | 0.531 | neutral | N | 0.501183907 | None | None | N |
Q/F | 0.8074 | likely_pathogenic | 0.8023 | pathogenic | -0.656 | Destabilizing | 0.994 | D | 0.781 | deleterious | None | None | None | None | N |
Q/G | 0.6023 | likely_pathogenic | 0.5663 | pathogenic | -1.554 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
Q/H | 0.5243 | ambiguous | 0.5109 | ambiguous | -1.322 | Destabilizing | 0.998 | D | 0.543 | neutral | N | 0.47867662 | None | None | N |
Q/I | 0.4981 | ambiguous | 0.4602 | ambiguous | -0.009 | Destabilizing | 0.985 | D | 0.678 | prob.neutral | None | None | None | None | N |
Q/K | 0.1679 | likely_benign | 0.1482 | benign | -0.547 | Destabilizing | 0.982 | D | 0.502 | neutral | N | 0.444386475 | None | None | N |
Q/L | 0.1302 | likely_benign | 0.1255 | benign | -0.009 | Destabilizing | 0.079 | N | 0.388 | neutral | N | 0.470266354 | None | None | N |
Q/M | 0.3323 | likely_benign | 0.3295 | benign | 0.136 | Stabilizing | 0.992 | D | 0.552 | neutral | None | None | None | None | N |
Q/N | 0.6899 | likely_pathogenic | 0.6795 | pathogenic | -1.265 | Destabilizing | 0.998 | D | 0.535 | neutral | None | None | None | None | N |
Q/P | 0.9292 | likely_pathogenic | 0.8908 | pathogenic | -0.361 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | N | 0.507883691 | None | None | N |
Q/R | 0.1805 | likely_benign | 0.1604 | benign | -0.777 | Destabilizing | 0.973 | D | 0.521 | neutral | N | 0.447810782 | None | None | N |
Q/S | 0.5728 | likely_pathogenic | 0.5682 | pathogenic | -1.519 | Destabilizing | 0.995 | D | 0.495 | neutral | None | None | None | None | N |
Q/T | 0.5378 | ambiguous | 0.4981 | ambiguous | -1.089 | Destabilizing | 0.878 | D | 0.604 | neutral | None | None | None | None | N |
Q/V | 0.3686 | ambiguous | 0.3457 | ambiguous | -0.361 | Destabilizing | 0.846 | D | 0.603 | neutral | None | None | None | None | N |
Q/W | 0.8154 | likely_pathogenic | 0.7821 | pathogenic | -0.816 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
Q/Y | 0.6479 | likely_pathogenic | 0.6523 | pathogenic | -0.407 | Destabilizing | 0.997 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.