Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26828 | 80707;80708;80709 | chr2:178565650;178565649;178565648 | chr2:179430377;179430376;179430375 |
N2AB | 25187 | 75784;75785;75786 | chr2:178565650;178565649;178565648 | chr2:179430377;179430376;179430375 |
N2A | 24260 | 73003;73004;73005 | chr2:178565650;178565649;178565648 | chr2:179430377;179430376;179430375 |
N2B | 17763 | 53512;53513;53514 | chr2:178565650;178565649;178565648 | chr2:179430377;179430376;179430375 |
Novex-1 | 17888 | 53887;53888;53889 | chr2:178565650;178565649;178565648 | chr2:179430377;179430376;179430375 |
Novex-2 | 17955 | 54088;54089;54090 | chr2:178565650;178565649;178565648 | chr2:179430377;179430376;179430375 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | None | N | 0.177 | 0.072 | 0.152612264143 | gnomAD-4.0.0 | 2.05283E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79913E-06 | 1.15937E-05 | 0 |
S/R | rs886055243 | None | 0.171 | N | 0.449 | 0.157 | 0.0806252709748 | gnomAD-4.0.0 | 4.77485E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.5776E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0842 | likely_benign | 0.0762 | benign | -0.517 | Destabilizing | 0.014 | N | 0.236 | neutral | None | None | None | None | N |
S/C | 0.1008 | likely_benign | 0.1199 | benign | -0.354 | Destabilizing | 0.828 | D | 0.411 | neutral | D | 0.522079254 | None | None | N |
S/D | 0.2998 | likely_benign | 0.3438 | ambiguous | 0.101 | Stabilizing | 0.038 | N | 0.197 | neutral | None | None | None | None | N |
S/E | 0.3709 | ambiguous | 0.4129 | ambiguous | 0.109 | Stabilizing | 0.038 | N | 0.189 | neutral | None | None | None | None | N |
S/F | 0.2122 | likely_benign | 0.1775 | benign | -0.662 | Destabilizing | 0.214 | N | 0.446 | neutral | None | None | None | None | N |
S/G | 0.083 | likely_benign | 0.0946 | benign | -0.765 | Destabilizing | None | N | 0.1 | neutral | N | 0.484561016 | None | None | N |
S/H | 0.2452 | likely_benign | 0.3104 | benign | -1.118 | Destabilizing | 0.214 | N | 0.419 | neutral | None | None | None | None | N |
S/I | 0.1182 | likely_benign | 0.1292 | benign | 0.035 | Stabilizing | None | N | 0.167 | neutral | N | 0.38170322 | None | None | N |
S/K | 0.4952 | ambiguous | 0.5951 | pathogenic | -0.55 | Destabilizing | 0.038 | N | 0.189 | neutral | None | None | None | None | N |
S/L | 0.1065 | likely_benign | 0.0921 | benign | 0.035 | Stabilizing | 0.006 | N | 0.396 | neutral | None | None | None | None | N |
S/M | 0.1323 | likely_benign | 0.1363 | benign | 0.017 | Stabilizing | 0.214 | N | 0.427 | neutral | None | None | None | None | N |
S/N | 0.0814 | likely_benign | 0.1009 | benign | -0.507 | Destabilizing | None | N | 0.177 | neutral | N | 0.444866477 | None | None | N |
S/P | 0.7702 | likely_pathogenic | 0.753 | pathogenic | -0.115 | Destabilizing | 0.356 | N | 0.449 | neutral | None | None | None | None | N |
S/Q | 0.3416 | ambiguous | 0.4176 | ambiguous | -0.561 | Destabilizing | 0.214 | N | 0.33 | neutral | None | None | None | None | N |
S/R | 0.4537 | ambiguous | 0.5548 | ambiguous | -0.47 | Destabilizing | 0.171 | N | 0.449 | neutral | N | 0.416642513 | None | None | N |
S/T | 0.0702 | likely_benign | 0.07 | benign | -0.509 | Destabilizing | 0.001 | N | 0.127 | neutral | N | 0.378124197 | None | None | N |
S/V | 0.12 | likely_benign | 0.1223 | benign | -0.115 | Destabilizing | 0.001 | N | 0.214 | neutral | None | None | None | None | N |
S/W | 0.3737 | ambiguous | 0.3658 | ambiguous | -0.723 | Destabilizing | 0.864 | D | 0.456 | neutral | None | None | None | None | N |
S/Y | 0.1779 | likely_benign | 0.1733 | benign | -0.423 | Destabilizing | 0.356 | N | 0.434 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.