Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26830 | 80713;80714;80715 | chr2:178565644;178565643;178565642 | chr2:179430371;179430370;179430369 |
N2AB | 25189 | 75790;75791;75792 | chr2:178565644;178565643;178565642 | chr2:179430371;179430370;179430369 |
N2A | 24262 | 73009;73010;73011 | chr2:178565644;178565643;178565642 | chr2:179430371;179430370;179430369 |
N2B | 17765 | 53518;53519;53520 | chr2:178565644;178565643;178565642 | chr2:179430371;179430370;179430369 |
Novex-1 | 17890 | 53893;53894;53895 | chr2:178565644;178565643;178565642 | chr2:179430371;179430370;179430369 |
Novex-2 | 17957 | 54094;54095;54096 | chr2:178565644;178565643;178565642 | chr2:179430371;179430370;179430369 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.472 | N | 0.464 | 0.263 | 0.431931272081 | gnomAD-4.0.0 | 3.18322E-06 | None | None | None | None | I | None | 0 | 2.28655E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02554E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1156 | likely_benign | 0.1115 | benign | -0.997 | Destabilizing | 0.004 | N | 0.153 | neutral | N | 0.487081246 | None | None | I |
V/C | 0.6588 | likely_pathogenic | 0.6713 | pathogenic | -0.847 | Destabilizing | 0.996 | D | 0.509 | neutral | None | None | None | None | I |
V/D | 0.8083 | likely_pathogenic | 0.7957 | pathogenic | -0.546 | Destabilizing | 0.91 | D | 0.596 | neutral | None | None | None | None | I |
V/E | 0.7133 | likely_pathogenic | 0.6976 | pathogenic | -0.55 | Destabilizing | 0.521 | D | 0.529 | neutral | N | 0.503209202 | None | None | I |
V/F | 0.2786 | likely_benign | 0.2699 | benign | -0.735 | Destabilizing | 0.984 | D | 0.535 | neutral | None | None | None | None | I |
V/G | 0.2806 | likely_benign | 0.2838 | benign | -1.283 | Destabilizing | 0.521 | D | 0.571 | neutral | N | 0.501767624 | None | None | I |
V/H | 0.8135 | likely_pathogenic | 0.8095 | pathogenic | -0.762 | Destabilizing | 0.987 | D | 0.609 | neutral | None | None | None | None | I |
V/I | 0.103 | likely_benign | 0.0938 | benign | -0.332 | Destabilizing | 0.706 | D | 0.496 | neutral | None | None | None | None | I |
V/K | 0.7049 | likely_pathogenic | 0.7133 | pathogenic | -0.848 | Destabilizing | 0.009 | N | 0.449 | neutral | None | None | None | None | I |
V/L | 0.3479 | ambiguous | 0.3318 | benign | -0.332 | Destabilizing | 0.472 | N | 0.464 | neutral | N | 0.500855833 | None | None | I |
V/M | 0.2294 | likely_benign | 0.2063 | benign | -0.411 | Destabilizing | 0.979 | D | 0.504 | neutral | N | 0.490664808 | None | None | I |
V/N | 0.6729 | likely_pathogenic | 0.6452 | pathogenic | -0.753 | Destabilizing | 0.91 | D | 0.611 | neutral | None | None | None | None | I |
V/P | 0.7961 | likely_pathogenic | 0.7917 | pathogenic | -0.517 | Destabilizing | 0.953 | D | 0.573 | neutral | None | None | None | None | I |
V/Q | 0.6347 | likely_pathogenic | 0.6421 | pathogenic | -0.854 | Destabilizing | 0.91 | D | 0.585 | neutral | None | None | None | None | I |
V/R | 0.6377 | likely_pathogenic | 0.6571 | pathogenic | -0.424 | Destabilizing | 0.835 | D | 0.6 | neutral | None | None | None | None | I |
V/S | 0.2946 | likely_benign | 0.2834 | benign | -1.261 | Destabilizing | 0.59 | D | 0.541 | neutral | None | None | None | None | I |
V/T | 0.1989 | likely_benign | 0.1869 | benign | -1.142 | Destabilizing | 0.742 | D | 0.471 | neutral | None | None | None | None | I |
V/W | 0.927 | likely_pathogenic | 0.9237 | pathogenic | -0.916 | Destabilizing | 0.996 | D | 0.68 | prob.neutral | None | None | None | None | I |
V/Y | 0.743 | likely_pathogenic | 0.7473 | pathogenic | -0.59 | Destabilizing | 0.984 | D | 0.538 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.