Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26832 | 80719;80720;80721 | chr2:178565638;178565637;178565636 | chr2:179430365;179430364;179430363 |
N2AB | 25191 | 75796;75797;75798 | chr2:178565638;178565637;178565636 | chr2:179430365;179430364;179430363 |
N2A | 24264 | 73015;73016;73017 | chr2:178565638;178565637;178565636 | chr2:179430365;179430364;179430363 |
N2B | 17767 | 53524;53525;53526 | chr2:178565638;178565637;178565636 | chr2:179430365;179430364;179430363 |
Novex-1 | 17892 | 53899;53900;53901 | chr2:178565638;178565637;178565636 | chr2:179430365;179430364;179430363 |
Novex-2 | 17959 | 54100;54101;54102 | chr2:178565638;178565637;178565636 | chr2:179430365;179430364;179430363 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs780512337 | 0.932 | 0.669 | N | 0.433 | 0.254 | 0.243398259712 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
E/K | rs780512337 | 0.932 | 0.669 | N | 0.433 | 0.254 | 0.243398259712 | gnomAD-4.0.0 | 4.77482E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57741E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.18 | likely_benign | 0.1687 | benign | -0.421 | Destabilizing | 0.625 | D | 0.478 | neutral | N | 0.504837501 | None | None | I |
E/C | 0.8354 | likely_pathogenic | 0.8296 | pathogenic | -0.138 | Destabilizing | 0.998 | D | 0.463 | neutral | None | None | None | None | I |
E/D | 0.1451 | likely_benign | 0.1392 | benign | -0.426 | Destabilizing | 0.012 | N | 0.184 | neutral | N | 0.465108464 | None | None | I |
E/F | 0.7018 | likely_pathogenic | 0.6877 | pathogenic | -0.039 | Destabilizing | 0.974 | D | 0.489 | neutral | None | None | None | None | I |
E/G | 0.2534 | likely_benign | 0.2242 | benign | -0.671 | Destabilizing | 0.801 | D | 0.509 | neutral | N | 0.466355582 | None | None | I |
E/H | 0.3942 | ambiguous | 0.4052 | ambiguous | 0.151 | Stabilizing | 0.974 | D | 0.509 | neutral | None | None | None | None | I |
E/I | 0.2977 | likely_benign | 0.2835 | benign | 0.221 | Stabilizing | 0.728 | D | 0.523 | neutral | None | None | None | None | I |
E/K | 0.1583 | likely_benign | 0.1474 | benign | 0.345 | Stabilizing | 0.669 | D | 0.433 | neutral | N | 0.508283238 | None | None | I |
E/L | 0.3804 | ambiguous | 0.3691 | ambiguous | 0.221 | Stabilizing | 0.728 | D | 0.499 | neutral | None | None | None | None | I |
E/M | 0.436 | ambiguous | 0.4206 | ambiguous | 0.283 | Stabilizing | 0.974 | D | 0.482 | neutral | None | None | None | None | I |
E/N | 0.2229 | likely_benign | 0.2152 | benign | -0.215 | Destabilizing | 0.728 | D | 0.46 | neutral | None | None | None | None | I |
E/P | 0.6801 | likely_pathogenic | 0.6452 | pathogenic | 0.028 | Stabilizing | 0.974 | D | 0.531 | neutral | None | None | None | None | I |
E/Q | 0.1271 | likely_benign | 0.1302 | benign | -0.127 | Destabilizing | 0.136 | N | 0.24 | neutral | D | 0.524252768 | None | None | I |
E/R | 0.2662 | likely_benign | 0.2715 | benign | 0.6 | Stabilizing | 0.842 | D | 0.5 | neutral | None | None | None | None | I |
E/S | 0.1839 | likely_benign | 0.1783 | benign | -0.358 | Destabilizing | 0.525 | D | 0.441 | neutral | None | None | None | None | I |
E/T | 0.1621 | likely_benign | 0.157 | benign | -0.14 | Destabilizing | 0.029 | N | 0.235 | neutral | None | None | None | None | I |
E/V | 0.1732 | likely_benign | 0.1678 | benign | 0.028 | Stabilizing | 0.051 | N | 0.376 | neutral | N | 0.460548095 | None | None | I |
E/W | 0.8938 | likely_pathogenic | 0.8934 | pathogenic | 0.198 | Stabilizing | 0.998 | D | 0.503 | neutral | None | None | None | None | I |
E/Y | 0.5905 | likely_pathogenic | 0.5831 | pathogenic | 0.234 | Stabilizing | 0.991 | D | 0.491 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.