Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26833 | 80722;80723;80724 | chr2:178565635;178565634;178565633 | chr2:179430362;179430361;179430360 |
N2AB | 25192 | 75799;75800;75801 | chr2:178565635;178565634;178565633 | chr2:179430362;179430361;179430360 |
N2A | 24265 | 73018;73019;73020 | chr2:178565635;178565634;178565633 | chr2:179430362;179430361;179430360 |
N2B | 17768 | 53527;53528;53529 | chr2:178565635;178565634;178565633 | chr2:179430362;179430361;179430360 |
Novex-1 | 17893 | 53902;53903;53904 | chr2:178565635;178565634;178565633 | chr2:179430362;179430361;179430360 |
Novex-2 | 17960 | 54103;54104;54105 | chr2:178565635;178565634;178565633 | chr2:179430362;179430361;179430360 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.01 | N | 0.127 | 0.134 | 0.0986583533028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0928 | likely_benign | 0.0898 | benign | -0.539 | Destabilizing | 0.01 | N | 0.135 | neutral | N | 0.428766448 | None | None | N |
S/C | 0.0895 | likely_benign | 0.0884 | benign | -0.312 | Destabilizing | 0.013 | N | 0.257 | neutral | N | 0.427459727 | None | None | N |
S/D | 0.7161 | likely_pathogenic | 0.7338 | pathogenic | -0.77 | Destabilizing | 0.704 | D | 0.389 | neutral | None | None | None | None | N |
S/E | 0.7575 | likely_pathogenic | 0.789 | pathogenic | -0.628 | Destabilizing | 0.704 | D | 0.349 | neutral | None | None | None | None | N |
S/F | 0.4866 | ambiguous | 0.4924 | ambiguous | -0.35 | Destabilizing | 0.759 | D | 0.511 | neutral | N | 0.475058885 | None | None | N |
S/G | 0.1281 | likely_benign | 0.1126 | benign | -0.914 | Destabilizing | 0.495 | N | 0.345 | neutral | None | None | None | None | N |
S/H | 0.6015 | likely_pathogenic | 0.6614 | pathogenic | -1.33 | Destabilizing | 0.893 | D | 0.439 | neutral | None | None | None | None | N |
S/I | 0.2327 | likely_benign | 0.2383 | benign | 0.393 | Stabilizing | 0.704 | D | 0.483 | neutral | None | None | None | None | N |
S/K | 0.8647 | likely_pathogenic | 0.8956 | pathogenic | -0.347 | Destabilizing | 0.704 | D | 0.347 | neutral | None | None | None | None | N |
S/L | 0.1702 | likely_benign | 0.1619 | benign | 0.393 | Stabilizing | 0.329 | N | 0.43 | neutral | None | None | None | None | N |
S/M | 0.256 | likely_benign | 0.2502 | benign | 0.296 | Stabilizing | 0.981 | D | 0.439 | neutral | None | None | None | None | N |
S/N | 0.2213 | likely_benign | 0.2334 | benign | -0.779 | Destabilizing | 0.704 | D | 0.439 | neutral | None | None | None | None | N |
S/P | 0.7001 | likely_pathogenic | 0.7177 | pathogenic | 0.119 | Stabilizing | 0.927 | D | 0.47 | neutral | N | 0.438036506 | None | None | N |
S/Q | 0.7036 | likely_pathogenic | 0.742 | pathogenic | -0.6 | Destabilizing | 0.944 | D | 0.455 | neutral | None | None | None | None | N |
S/R | 0.8241 | likely_pathogenic | 0.8602 | pathogenic | -0.634 | Destabilizing | 0.944 | D | 0.473 | neutral | None | None | None | None | N |
S/T | 0.0769 | likely_benign | 0.0737 | benign | -0.529 | Destabilizing | 0.01 | N | 0.127 | neutral | N | 0.41710666 | None | None | N |
S/V | 0.1575 | likely_benign | 0.1661 | benign | 0.119 | Stabilizing | 0.543 | D | 0.447 | neutral | None | None | None | None | N |
S/W | 0.6612 | likely_pathogenic | 0.6766 | pathogenic | -0.585 | Destabilizing | 0.985 | D | 0.537 | neutral | None | None | None | None | N |
S/Y | 0.4006 | ambiguous | 0.4356 | ambiguous | -0.158 | Destabilizing | 0.006 | N | 0.365 | neutral | N | 0.494260722 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.