Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26834 | 80725;80726;80727 | chr2:178565632;178565631;178565630 | chr2:179430359;179430358;179430357 |
N2AB | 25193 | 75802;75803;75804 | chr2:178565632;178565631;178565630 | chr2:179430359;179430358;179430357 |
N2A | 24266 | 73021;73022;73023 | chr2:178565632;178565631;178565630 | chr2:179430359;179430358;179430357 |
N2B | 17769 | 53530;53531;53532 | chr2:178565632;178565631;178565630 | chr2:179430359;179430358;179430357 |
Novex-1 | 17894 | 53905;53906;53907 | chr2:178565632;178565631;178565630 | chr2:179430359;179430358;179430357 |
Novex-2 | 17961 | 54106;54107;54108 | chr2:178565632;178565631;178565630 | chr2:179430359;179430358;179430357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.992 | N | 0.627 | 0.402 | 0.289474373501 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6921 | likely_pathogenic | 0.6235 | pathogenic | 0.025 | Stabilizing | 0.998 | D | 0.668 | neutral | None | None | None | None | N |
K/C | 0.9147 | likely_pathogenic | 0.9018 | pathogenic | -0.338 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/D | 0.849 | likely_pathogenic | 0.8079 | pathogenic | 0.141 | Stabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/E | 0.6027 | likely_pathogenic | 0.5293 | ambiguous | 0.156 | Stabilizing | 0.992 | D | 0.627 | neutral | N | 0.494911296 | None | None | N |
K/F | 0.9555 | likely_pathogenic | 0.9414 | pathogenic | -0.162 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/G | 0.7284 | likely_pathogenic | 0.6751 | pathogenic | -0.169 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | N |
K/H | 0.5756 | likely_pathogenic | 0.5313 | ambiguous | -0.336 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/I | 0.7946 | likely_pathogenic | 0.7322 | pathogenic | 0.456 | Stabilizing | 0.977 | D | 0.687 | prob.neutral | D | 0.525735635 | None | None | N |
K/L | 0.7384 | likely_pathogenic | 0.6874 | pathogenic | 0.456 | Stabilizing | 0.982 | D | 0.618 | neutral | None | None | None | None | N |
K/M | 0.6541 | likely_pathogenic | 0.5794 | pathogenic | 0.111 | Stabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/N | 0.7868 | likely_pathogenic | 0.7322 | pathogenic | 0.131 | Stabilizing | 0.999 | D | 0.735 | prob.delet. | N | 0.495450013 | None | None | N |
K/P | 0.7755 | likely_pathogenic | 0.7531 | pathogenic | 0.34 | Stabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
K/Q | 0.3699 | ambiguous | 0.3163 | benign | 0.002 | Stabilizing | 0.994 | D | 0.718 | prob.delet. | N | 0.514171847 | None | None | N |
K/R | 0.0856 | likely_benign | 0.0852 | benign | -0.035 | Destabilizing | 0.987 | D | 0.579 | neutral | N | 0.451600449 | None | None | N |
K/S | 0.76 | likely_pathogenic | 0.7023 | pathogenic | -0.353 | Destabilizing | 0.998 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/T | 0.5012 | ambiguous | 0.4149 | ambiguous | -0.189 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | N | 0.484350372 | None | None | N |
K/V | 0.7108 | likely_pathogenic | 0.6389 | pathogenic | 0.34 | Stabilizing | 0.987 | D | 0.655 | neutral | None | None | None | None | N |
K/W | 0.9166 | likely_pathogenic | 0.9073 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/Y | 0.8875 | likely_pathogenic | 0.8598 | pathogenic | 0.158 | Stabilizing | 0.997 | D | 0.662 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.